Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2302 ATGATTAGAGTTTGGTTTGTGGTGTTGATGGTTCTCTACAATTTGATGTTCTCTTCAACTGTGGCTGGCTTGGATAATTCCACAGTACCTCCATTTGTAAATATTGGAGTACTCTACTCTTTCAATACTAGTGTTGGTAGAATGGTGAAAATTGCGGTAGAAGCTGCGGTTGCAGATATAAATTCTGATCCTACTATTCTTGGTAATACTAAGTTGAACCTCTCACTGCAAGAAGATTCAAAATACAGAGGCTTTTTGAGCATTGCTGAGGCGTTGCAGCTCATGGCGACACAGACTGTGGCGATTATTGGTCCTCAGACGTCTACAACAGCTCATGTCATATCTCATATAGCAAATGAGCTCCAGGTTCCTTTGCTATCATTTACAGCCACTGATCCTACTCTTTCTTCGCTTCAATTCCCGTTCTTTTTGAGAACTTCTTTCAATGACATTTTTCAAATGACTGCAATAGCAGACATTGTTAGCCACTATGGTTGGAGAGAGGTTATCACAGTCTATGGTGATGACGACCATGGGAGGAATGGAATTAGTGCGTTGGGGGATAAGCTTGCTGAGAGGCGTTGCAAGATCTCGTTTAAAGCAGCAATGACTCCTGACGCAACGAGTGAGGAGATTACTGATGTGCTAGTTCAGGTTGCCCTGGCAGAATCTCGGATTATTGTTCTGCACACAAGTACTGCTTGGGGTCCAAAGGTGTTGAGTGTGGCGAAGTCTCTTGGAATGTTGCAAAATGGTTATGTCTGGATAGCTACTACTTTTCTCACATCTTATATTGACATAGATAGTCCTCTCTCTTCAGATGAAATGGATAACATTCAAGGAGTTCTAACACTAAGAATGTACATACCGGATTCTAAGCTCAAAAGATCGTTCATTTCTCGGTGGACCAATTTGACTAGTGGAAAGACGGCAAATGGTCCTCTTGGTTTAAGTACTTATGGTATCTTTGCATATGATACTATTTATGTGCTTGCCCGTGCCCTTGATACATTTCTGAAACAAGGAAACCAAATTACGTTTTCGAGCGATCCAAAGTTAAATCAACCACGTGGAGACAGCTTGCATCTTGACGCTGTGAAAATTTTCAATGAGGGAAATCTGTTACGTAAAAGTATATATGAGGTTAACATGACTGGTGTAACAGGTCCATTCAGGTATACACCTGATGGAAACCTTGCAAATCCAGCATATGAGATCATCAATGTGATCGGAACAGGGACTCGCAGGGTCGGTTATTGGTCTAATTACTCTGGATTATCAGTTATTCCTCCAGAAACACTTTATTCAAAACCGCCTAATCGTTCCATTGATAATCAAAAGCTACTCACGGTCTTTTGGCCAGGAGAAACAACCCAGAGACCACGCGGTTGGGTTTTTCCGAACAATGGAAAGCTATTAAAAATCGGAGTACCTAGAAGGACTAGTTACCGTGAATTTGTTTCTCAGGTACAATCCACTGACACGTTCAAGGGATTCTGCATTGATGTATTTCTTTCTGCAGTAAACTTGTTACCTTATGCTGTCCCCTATAAGTTTGTTCCATATGGTGATGGTCAAAACAACCCTAGTAATACTGAGCTTGTGCGTCTGATCACTGCCGGTGTCTTTGATGCTGCAGTAGGTGACATCACAATTACTACAGAGAGAACAAAGATGGTGGATTTTACTCAGCCATTTATTGAGTCTGGCCTAGTGGTAGTAGCATCGGTTAAGAAGACGGATTCAAATGCTTGGGCATTTTTGACACCATTTACACCAATGATGTGGACTGTAACTGCTATCTTTTTCCTACTAGTGGGAGCTGTTGTTTGGATTCTAGAGCATAGACTGAATGATGATTTTAGAGGACCTCCTAAAAAACAAGTAGCCACAATTTTGTGGTTTAGCTTTTCAACTATGTTCTTCGCTCACAGGGAAAATACCGTGAGCACTCTTGGTCGTTTTGTCGTGCTTATATGGCTATTTGTAGTTCTAATAATTAACTCGAGTTACACAGCAAGCCTGACTTCAATCCTCACAGTGCAACAACTTTCTTCACCTATTAAAGGCATTGAAAGTTTAGTAAATAGCAAAGAGCCTGTTGGTTACTTGCAGGGTTCCTTTTCCCGGTCTTATTTGATTGACGAAATCGGTATTCATGAATCGAGATTAGTTCCTATGAAAACACCTGAAGAAACTATGAAGGCACTGGAGAAAGGTCACCAGAACGGTGGTATTGCTGCATATGTTGATGAGCGTGCTTACATAGAGCTCTTCCTTTCTAGCCGGTGTGATTTTAGTATTGTCGGTCAAGAGTTTACCAGAAATGGTTGGGGATTTGCCTTTCCACCAGACTCACCATTAGCAGTTGACCTGTCAACTGCCATTTTGGAGTTGGCAGAAAGTGGAGATTTACAAAGGATCCATGACAAATGGCTTTTAAGCAGTGCTTGTAGATCACAAGGTGCAAAGCTTGAAGTGGACAGACTCAATCTCAGAAGCTTTTGGGGCCTTTATCTAGTTTGTGGTTTGGCATGTTTCCTTGCTCTCCTAATATATTTTATTCAGACCTTGAGGCAGTACAAGAAACACAGTCCAGACGAAATAGATTCTTCTGGCCAAGGTTCAGGATCTTCGCGTCTGCGGACGTTTCTTTCATTCGTAGATGAAAAAGAAGCGATAGTTAAAAACCGCTCAAAGAGAAGGCAAATGGAAAGGATATCATATAGAAGCACAAGTGAGGTTGGATCAAACATCACCTCCAATAAAGATTTTTCTCGGTCATCAACATCGTTAAACAGAATTGATTCTCCTAATATAGTCTGA 2826 0.4126 MIRVWFVVLMVLYNLMFSSTVAGLDNSTVPPFVNIGVLYSFNTSVGRMVKIAVEAAVADINSDPTILGNTKLNLSLQEDSKYRGFLSIAEALQLMATQTVAIIGPQTSTTAHVISHIANELQVPLLSFTATDPTLSSLQFPFFLRTSFNDIFQMTAIADIVSHYGWREVITVYGDDDHGRNGISALGDKLAERRCKISFKAAMTPDATSEEITDVLVQVALAESRIIVLHTSTAWGPKVLSVAKSLGMLQNGYVWIATTFLTSYIDIDSPLSSDEMDNIQGVLTLRMYIPDSKLKRSFISRWTNLTSGKTANGPLGLSTYGIFAYDTIYVLARALDTFLKQGNQITFSSDPKLNQPRGDSLHLDAVKIFNEGNLLRKSIYEVNMTGVTGPFRYTPDGNLANPAYEIINVIGTGTRRVGYWSNYSGLSVIPPETLYSKPPNRSIDNQKLLTVFWPGETTQRPRGWVFPNNGKLLKIGVPRRTSYREFVSQVQSTDTFKGFCIDVFLSAVNLLPYAVPYKFVPYGDGQNNPSNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPFIESGLVVVASVKKTDSNAWAFLTPFTPMMWTVTAIFFLLVGAVVWILEHRLNDDFRGPPKKQVATILWFSFSTMFFAHRENTVSTLGRFVVLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLVNSKEPVGYLQGSFSRSYLIDEIGIHESRLVPMKTPEETMKALEKGHQNGGIAAYVDERAYIELFLSSRCDFSIVGQEFTRNGWGFAFPPDSPLAVDLSTAILELAESGDLQRIHDKWLLSSACRSQGAKLEVDRLNLRSFWGLYLVCGLACFLALLIYFIQTLRQYKKHSPDEIDSSGQGSGSSRLRTFLSFVDEKEAIVKNRSKRRQMERISYRSTSEVGSNITSNKDFSRSSTSLNRIDSPNIV* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2302 941 Gene3D - 149 426 - -
Mtr8g2302 941 PANTHER GLUTAMATE RECEPTOR 11 931 - -
Mtr8g2302 941 CDD PBP1_GABAb_receptor_plant 34 430 IPR044440 -
Mtr8g2302 941 PIRSF IGluLR_plant 1 939 IPR017103 -
Mtr8g2302 941 Gene3D - 51 401 - -
Mtr8g2302 941 MobiDBLite consensus disorder prediction 916 941 - -
Mtr8g2302 941 CDD GluR_Plant 471 813 - -
Mtr8g2302 941 Pfam Receptor family ligand binding region 50 411 IPR001828 -
Mtr8g2302 941 SMART GluR_14 474 815 IPR001320 GO:0015276|GO:0016020
Mtr8g2302 941 Pfam Bacterial extracellular solute-binding proteins, family 3 493 813 IPR001638 -
Mtr8g2302 941 Gene3D - 584 710 - -
Mtr8g2302 941 Pfam Ligand-gated ion channel 814 846 IPR001320 GO:0015276|GO:0016020
Mtr8g2302 941 Gene3D - 738 820 - -
Mtr8g2302 941 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 11 931 - -
Mtr8g2302 941 SUPERFAMILY Periplasmic binding protein-like I 29 465 IPR028082 -
Mtr8g2302 941 Gene3D - 473 583 - -
Mtr8g2302 941 SUPERFAMILY Periplasmic binding protein-like II 448 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2302 Mtr-Chr8 33438951 33443716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2302 5 915 Ion Channels AT3G51480 57.969 0.0 1127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2302 K05387 - gmx:100788917 1590.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0988 5 9819542 9824523 Mtr8g2302 8 33438951 33443716 PCT