Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2301 ATGAAACTTTTCCTCTTCCTCCGGTTTCTGTTCCTTTTCTTCTTCTTCTCGCTTTACAATCAACACTGTTGTTGCATCCATGCCCTTTCTCGCTCTCCAACAGCACGCTCCATTCTCTCTCTTCCTCCTCCTCCTAAGCAAGCAACATCACTGATTGCCACACTAGATGGGACCATGTATTTGGTGGCCAACCATGAGAATGGTCCCATGAGGATGATATGGTCATTCTGCTCAGGATCGCCGATCTACAGTTCGTATCAAGCTCCTATCAATAAGGGTCGCGGTAAAGGTAAAGAAAATGCATCTGCAGTGCCAGTTAGTGGGTTTATGGAATGTGGGGATGATTGGTCATTGTACATGCACGACGAGCACTACGGTAAAATGAGAATCTCAGAATCTATTGCAGAATTTGTACCTCGTACACCTACCATCTCACATGATGGAGCAATTATACTTGGATATAGAGAAATCACTTTGTTTGAAGTTGAAGCTAAAACTGGGTCGATCATTCGAATCCATGCCAAGCCTGATCCTGATAATGCTTCCGCACCTTTGAGTGATGATAGGAAGACCGCTAGAAGCATCGCCAATGCAGATAATAAAGTTCTTGCTGATCCTGAAAAGCTAAATTCATCAGAGCCGGTGCTCAAGATTTTTAGAACAGATTATTTTCTGAAGTCTGTTTGCCCCAACTCAGGAATAGTATTATGGAATTTGAGAGTAGCTGAATTTGAGGCTGTATTATTATGCCAACATACTACATTTGAGGTAGAGGATGAAAATCCTTCGGTCAGCGGTCTCAATTTTACGATGCCTTACCCATGTCAAGAGATGCAAAAAGTCTTTCGCCTGAAAAAGAATTTTCTACTAGAACCTTTAATCACTGAAAGTTCACATGGAGCTTATCATGGAAATGATATACTCTTAATGCCTACTTCAGATATGATGATTCCTTTGCAGCCTAATATTGATAGATTTTTCGATGGTCATGATGATAATATGATGATGCTTCCTATGCCTTTTCTGCAACAAAATAATGATACAACAGATGAACTCTTTCAGCCTCTCGTTGAGATTGCTTTAAATTTGAACAAGAAGAGTGGATGGTCAACTCCATTACCTAATGTATTGTTTAAGGTTTTTGGTCTGGTTTTGGGCATTTCAGTCATCATCTACTTTATTTTTGTGAAGGTGTTTAAGAATGATAGAGAAGTATGGCCGAACTTTAATCAAGTTGATGAAGGTATTGATGGACGAAGAATCGGCAAATTATTCGTTTCAAATAAAGAGATTGCTATAGGAAGTAATGGTACCATTATCTTTGATGGAAGATATGAAGGCCGATCAGTTGCAGTCAAGCGGCTTGTCAAAGCTCATCATAGTGTAGCCTCTAAAGAAATCCAAAACCTCATTGTGTCTGACTATCATCCAAACATTGTCCGATGGCATGGGGTGGAGCATGATCAAGATTTTATTTACCTTGCACTGGAACGTTGTATTTGCAACTTAGACGATTTGATTCAAATTTATTCAGATACATCAGAAAATTCTGGTTTTAGGAAGGACCAAGCATTCATATGTTTGATAAAGAGCCAAATGGAGACAGGGAATGATACTACACAATATCTTTGGAAAGAAAATGGCTATCCATCACCTCTACTACTGAAATTGATGAGGGATATTGTTGCCGGGGTTGTTCATTTGCATGAACTAGGAATTATACATCGAGATTTGAAACCCCAAAATGTTCTATTAATCAAGGAAAGATCCTTATGTGCAAAGCTTTCTGACATGGGCATTAGCAAACGTCTTCTTGATAACATGTCCTCTTTGGGTCATAGTGCTACTGGTGGGGGCAGTTCAGGTTGGCAAGCCCCAGAGCAGCTTGTTCAAGGACGCCAAACACGAGCTGTGGATATATTCAATTTAGGTTGTATTCTTTTTTTCTGTATGACTGGGGGAAAACATCCATTTGGACAGCATCTTGAGCGTGATATCAATATCGTGAACAACCGAAAAAATCTTTTCTTAGTGCAGTTCATTCCGGAAGCTGAGGATCTTATTAGCTGTTTATTAAACCCTGACCCTAATCTAAGACCGAAAGCGACTGAAGTGTTGCAGCATCCTTTTTTCTGGAATTCCGAGACGAGACTTTCATTTTTACGTGACACCAGTGACAGGGTGGAACTGGAAGATAGATATCTTCATAGTTCTGATCTTTTGAGGGACTTAGAAAGCATTGCCGCAACGGCCTTAGGTGGTAAGTGGGATGAAAAGATGGAACCAGCTTTCATTGTTAACATTGGTCGTTACCGGCGTTATAACTTCAACAGTGTTCGAGACTTGTTGCGGGTTATGAGAAACAAACTAAATCATTATGGAGAATTGCCACCACAAATCCAGGAACTAGTTGGACCTGTTCCTGAAGGATACGATGACTACTTTGCAAACCGATACCCAAGACTCTTGATTGAAGTGTATAATGTTATATGCAAGCATTGCAAGGAGGAAGAGTGTTTTCAAAGGTATTTTTAA 2535 0.4008 MKLFLFLRFLFLFFFFSLYNQHCCCIHALSRSPTARSILSLPPPPKQATSLIATLDGTMYLVANHENGPMRMIWSFCSGSPIYSSYQAPINKGRGKGKENASAVPVSGFMECGDDWSLYMHDEHYGKMRISESIAEFVPRTPTISHDGAIILGYREITLFEVEAKTGSIIRIHAKPDPDNASAPLSDDRKTARSIANADNKVLADPEKLNSSEPVLKIFRTDYFLKSVCPNSGIVLWNLRVAEFEAVLLCQHTTFEVEDENPSVSGLNFTMPYPCQEMQKVFRLKKNFLLEPLITESSHGAYHGNDILLMPTSDMMIPLQPNIDRFFDGHDDNMMMLPMPFLQQNNDTTDELFQPLVEIALNLNKKSGWSTPLPNVLFKVFGLVLGISVIIYFIFVKVFKNDREVWPNFNQVDEGIDGRRIGKLFVSNKEIAIGSNGTIIFDGRYEGRSVAVKRLVKAHHSVASKEIQNLIVSDYHPNIVRWHGVEHDQDFIYLALERCICNLDDLIQIYSDTSENSGFRKDQAFICLIKSQMETGNDTTQYLWKENGYPSPLLLKLMRDIVAGVVHLHELGIIHRDLKPQNVLLIKERSLCAKLSDMGISKRLLDNMSSLGHSATGGGSSGWQAPEQLVQGRQTRAVDIFNLGCILFFCMTGGKHPFGQHLERDINIVNNRKNLFLVQFIPEAEDLISCLLNPDPNLRPKATEVLQHPFFWNSETRLSFLRDTSDRVELEDRYLHSSDLLRDLESIAATALGGKWDEKMEPAFIVNIGRYRRYNFNSVRDLLRVMRNKLNHYGELPPQIQELVGPVPEGYDDYFANRYPRLLIEVYNVICKHCKEEECFQRYF* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2301 844 ProSiteProfiles KEN domain profile. 714 844 IPR010513 GO:0004540|GO:0006397
Mtr8g2301 844 SUPERFAMILY Protein kinase-like (PK-like) 425 715 IPR011009 -
Mtr8g2301 844 PANTHER IRE1-RELATED 7 844 IPR045133 GO:0004521|GO:0004674|GO:0030968
Mtr8g2301 844 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 7 844 - -
Mtr8g2301 844 CDD RNase_Ire1 715 844 - -
Mtr8g2301 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 573 585 IPR008271 GO:0004672|GO:0006468
Mtr8g2301 844 Gene3D KEN domain 714 844 IPR038357 -
Mtr8g2301 844 Pfam Protein kinase domain 428 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2301 844 ProSiteProfiles Protein kinase domain profile. 425 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2301 844 SMART serkin_6 425 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2301 844 Gene3D Phosphorylase Kinase; domain 1 413 497 - -
Mtr8g2301 844 Pfam Ribonuclease 2-5A 717 844 IPR010513 GO:0004540|GO:0006397
Mtr8g2301 844 Gene3D Transferase(Phosphotransferase) domain 1 535 713 - -
Mtr8g2301 844 SMART PGNneu 777 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2301 Mtr-Chr8 33427635 33436767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2301 449 710 MAP Kinase Kinase Kinase AT3G06030 25.940 1.26e-21 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Mtr8g2301 Pkinase 1.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2301 K08852 - gmx:100788389 1126.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0995 5 9875459 9882143 Mtr8g2301 8 33427635 33436767 PCT