Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2294 ATGCCTATTGAGATAATTGACCTTACAAGTTCCCCCGACTCACCTCCATCAACACCTGTATCTTTATCTAATCTACCAACGATCCTTAATTTTGCTCCCGTTTCTACCAACCCTAATCTTCACCACCAAATCCATCCCCACCAGCACCAAACTACCTTGTTTGTACCACCACCTCCAGGATTTGAGACCCCTCAAATTGCTACCGGTTGGCCTCAACCTGGCATGTATCATAGCCAAATTGCAATGGTTCTCAAACCGTTACCTGAACCAAAGACATCCCAATTCTCAAATGGAGCTAGGCTCGGGGTTTCTTGGAGTCAATTAGAGCATGACTTATTTCTGATGGGGCTGATTGAGTATGGAAAAGGGAAATGGAGCAAAATTGCTAAGAACTATGTATCTAGCAAGACACGACAACAAGTTAAAAGCTATGGTTTAAGCTTCTTCATGTACCTACCAGCCACATTTGTGCATGGTTTTAGGAAAAGAAAACAAATTGCAAATCCCAGCAACTCTGCTTCCAAGAGAAACAGGAACTCACCATCTGCTCCATATTATGGAGAAGAAGCTAGCAGCAGCAACACCAACAACTATGAAGCAATCACTTCCATGACTCTGCCTAGTGCTTCTGATGATGGAGGAGTTGATTTGGAACTTCGTTTGGGTTTGTCTAAGTGA 678 0.4322 MPIEIIDLTSSPDSPPSTPVSLSNLPTILNFAPVSTNPNLHHQIHPHQHQTTLFVPPPPGFETPQIATGWPQPGMYHSQIAMVLKPLPEPKTSQFSNGARLGVSWSQLEHDLFLMGLIEYGKGKWSKIAKNYVSSKTRQQVKSYGLSFFMYLPATFVHGFRKRKQIANPSNSASKRNRNSPSAPYYGEEASSSNTNNYEAITSMTLPSASDDGGVDLELRLGLSK* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2294 225 CDD SANT 104 144 IPR001005 -
Mtr8g2294 225 ProSiteProfiles Myb-like domain profile. 104 149 IPR001005 -
Mtr8g2294 225 MobiDBLite consensus disorder prediction 1 20 - -
Mtr8g2294 225 SUPERFAMILY Homeodomain-like 104 149 IPR009057 -
Mtr8g2294 225 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 13 164 - -
Mtr8g2294 225 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 162 222 - -
Mtr8g2294 225 ProSiteProfiles SANT domain profile. 100 153 IPR017884 -
Mtr8g2294 225 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 13 164 - -
Mtr8g2294 225 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 162 222 - -
Mtr8g2294 225 Pfam Myb-like DNA-binding domain 104 144 IPR001005 -
Mtr8g2294 225 SMART sant 101 151 IPR001005 -
Mtr8g2294 225 MobiDBLite consensus disorder prediction 167 193 - -
Mtr8g2294 225 Gene3D - 103 152 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr8g2294 Myb_DNA-binding 5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2294 - - mtr:MTR_8g073050 449.899