Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2285 ATGGCAGTTCTTGAATTCAAGAGAGCCCGTGTTCGAGCCCCACTGGTGCCTTTGGAGAGAGATAAATGTAAATACTTTTGTAAGTGTTCTTTGAGCCCGAAGATCTTCCCTGCCTTGGACTGGGCACCATCCCCTCACCTTAAAATTTTTAACAAAGCAACAAAACTTATTCCAACAAAACTGTTTGCCACACCTGATGGTACCATTTATTTTGTGGCCAACTACGAGAATGGTCGCACGAGGATATTATGGTCATTCTCCACAGGATCGCCAACCTACAGCTCGTATCAAGCTCCTGGAGCTACCGATTTTTTGGAGTGTGAGGATGATTGGTCATTGTACATGCAGGACGAGTATTACGGCAAATTGATAATATTACAATCTATTGGAGAAGTTGTAGATCTTGCGCCTATGATTTCATATAAAGGAGAAGCTACAATTGGATCCAAAAAAATCACTTCGTTTCAAGTTGACGCCAAAACTGGGTCGGTCAGTACAAATAGTAAGAATTTTGCTGGTCTTCGAAATTTAAATGCATCAAAGCCGCTGCTGATCAATATTTATAGGAAAGATCTTTTTCTGAAGTATGATGGTCCCACGTCGGGATCAGGATTTTGGAATTTGACAGTAGCCGAGTTCGATGCAGTGTTATTATGCCAACATTTAACTACATTTCACATAGAGGATCTCAATTTTAAAATGCCTTACCCATGTAAAAAGAAGCAAAAAGTGTTCAAACTGAATAAGAACTTTCTGTTAGAATCTTTAATCAGTGAAAGTTCACATGGGGCTTATCATGGAAAAGATACACTCTCAATGCCTGCCTCAGATAGGATGATTCAGTTGCAGCCTAATTATGATAGATTTTTCAATAATCATGATGGTAATATGGCAATGCCTCCTACGCCTTTTCCACAACAAAATGATTACAAGAGGAAAGATAAACTCCGTCAACCTCTCACTGAGATCAGTGATTTACCAGGACATGCTTATTTGAACAAGAAGAGTGGATGGCCAACTCCATCACCTACTATGTTCGTTATTCTGTTGGTCGTCGTTTCACACTACTGCTATCTTGTGGTAAAGGGGATTAAGTATAAGTATATACCAAAGGATACTAATAGAGAAGTATCGATGAACTTTAATGAAGGTGTTGATGGAGAAATAATTGGCGAATTATTCGTTTCAAAAAAAGAGATTGGCCGGGGAAGGAGAAGGACGAATGCTACCGCTGTCCTGCATGATGGTCAATCAGTTGCAGTCAAGCGGCTTCTCAAATCTCGTCATAGTGTAGCTCTAAACGAAATCAAAAAACTTGTGTCAGACCATCATCAGAACATTGTCAGATTGTATGGGGTGGAGTACGATGAAGATTTTATTTACCTTGCACTCGAGCGTTGTACTTGCAACTTAAATGATTTGGTTCAAGTGGAGTCAGGGAAGGATACTACAGAATATCTTTGGAAAAAAAATGACCATCCATCACCTCTACTACTAAAACTGATGAGGGGTATTGTTGCAGGGGTTGTTCATTTGCATAAACTAGGAATAATACACGGAAATTTGAAACCTCAAAATGTTCTAATAATCAAGGATAGATCCTTAAGTGTAAAGCTTTCTGACATGGCCATTACCCGACATGTTCCTGGGAAGTCTGTTTTCGCCAAATCCTACTGTACAGGTTGGCATGCCCCTGAGCAGCAACAAGGAACGGAAACACGAGCTGTAGACATATTCAGTTTAGGTTGTATTCTTTTTTTCTGTTTGACTAAGGGAAGCCATCCATTTGGAGATGATCATCTTTGGCGTGAGTCCAATATCCTGAACGATCGAAAAGATCTTTCCTTAGTGGAGTTCATTCCGGAAGCTGAGGATCTTATTAGCTGTTTATTAAACCCTGATCAGAATCTAAGGCCGAACGCAGCTGAAGTGTTGCAGCATCCTTTTTTCCGGAATTCCCAGAAGAGAGTTTCATTTTTACTTGACACCGGTGACAAGACGGAACTAATTGATGACCCAATTGTGGTCAAGGAACATCAGATTTTTTAA 2049 0.4007 MAVLEFKRARVRAPLVPLERDKCKYFCKCSLSPKIFPALDWAPSPHLKIFNKATKLIPTKLFATPDGTIYFVANYENGRTRILWSFSTGSPTYSSYQAPGATDFLECEDDWSLYMQDEYYGKLIILQSIGEVVDLAPMISYKGEATIGSKKITSFQVDAKTGSVSTNSKNFAGLRNLNASKPLLINIYRKDLFLKYDGPTSGSGFWNLTVAEFDAVLLCQHLTTFHIEDLNFKMPYPCKKKQKVFKLNKNFLLESLISESSHGAYHGKDTLSMPASDRMIQLQPNYDRFFNNHDGNMAMPPTPFPQQNDYKRKDKLRQPLTEISDLPGHAYLNKKSGWPTPSPTMFVILLVVVSHYCYLVVKGIKYKYIPKDTNREVSMNFNEGVDGEIIGELFVSKKEIGRGRRRTNATAVLHDGQSVAVKRLLKSRHSVALNEIKKLVSDHHQNIVRLYGVEYDEDFIYLALERCTCNLNDLVQVESGKDTTEYLWKKNDHPSPLLLKLMRGIVAGVVHLHKLGIIHGNLKPQNVLIIKDRSLSVKLSDMAITRHVPGKSVFAKSYCTGWHAPEQQQGTETRAVDIFSLGCILFFCLTKGSHPFGDDHLWRESNILNDRKDLSLVEFIPEAEDLISCLLNPDQNLRPNAAEVLQHPFFRNSQKRVSFLLDTGDKTELIDDPIVVKEHQIF* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2285 682 ProSiteProfiles Protein kinase domain profile. 394 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2285 682 Gene3D Transferase(Phosphotransferase) domain 1 464 667 - -
Mtr8g2285 682 Gene3D Phosphorylase Kinase; domain 1 382 463 - -
Mtr8g2285 682 Pfam Protein kinase domain 395 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2285 682 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 52 484 - -
Mtr8g2285 682 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 484 672 - -
Mtr8g2285 682 PANTHER IRE1-RELATED 52 484 IPR045133 GO:0004521|GO:0004674|GO:0030968
Mtr8g2285 682 PANTHER IRE1-RELATED 484 672 IPR045133 GO:0004521|GO:0004674|GO:0030968
Mtr8g2285 682 SUPERFAMILY Protein kinase-like (PK-like) 393 655 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2285 Mtr-Chr8 33143731 33147328 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2285 398 663 EF-hand Containing Proteins AT5G12180 27.368 1.25e-16 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Mtr8g2285 Pkinase 7.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2285 K08852 - gmx:100788389 549.666