Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2278 ATGATCATTGATAGGCCACCATCCATGGCTCAAAATCCTATGACAAGCAGATCTTCTTTTAGCTCTAACAATGGCAATGAGAATACCAATGTGAACAACCATGCTGCTGCTAACAATGCTGATGGCTATGATAGTGATAGCTCAAATTTGGCAACACCCACACCGTCTACTCTGTCTATGACTGTTCCAGCAGAACTCGCTGGAGCTATACCCTTAATCGACAGATTTCAGGTGGATGGATTTTTAAAGCTGATGCATAAACAAATTCAATCTGCTGGGAAACGTGGATTTTTTTCTAAAAGATCTTCAGATCCCCAAGCTCGTGAAAAATTTACATTTGAGGACATGCTGTCTTTTCAAAAGGATCCAATACCAACAGCGCTGCTTAAAATTAATGGTGATTTAGTAAGTCGAGCGACAAAGTTATTCCAGATAATTTTGAAATATATTGGAGTTGATTCGTCTGATTGCACAACTCCATTAAGCTTGGATGAACGAGTTGAGCTTGTCGGCAAACTATACAAGCAAAGTTTGAAACGCGCAGAACTCCGAGACGAGCTTTTTGTTCAGATATCAAAACAAACAAGAAATAACCCTGATAGGCAATACTTGATCAAATCATGGGAGCTTATGTATGTATGTGCATCCTCTATGTCTCCAAGTAAAGACATTGCCATTTATCTGTCAGAATACGTTCATAACATAGCAAATGATGTAGCTACTGATTCTGAGATCCAAGCCCTTGCGTTAAATACGTTTAATGCTTTGAAGCGTTCTGTTAAGGCTGGTCCTAGACATATAATACCTGGGCGAGAAGAGATTGAAGCTTTGTTGACTGGGAGGAAGCTTACAACTATAGTGTTCTTCTTAGATGAAACTTTTGAAGAAATTACATATGACATGTCAACAACAGTTGCTGATGCTGTCGAGGAACTTGCGGGGCTCATTAAACTGTCAACATACTCTAGCTTTAGTCTGTTTGAATGTCGTAAAGTTGTTACAAGTTCCAAATCACCTGATCCTGTGAACGAGGAGTACATTGGATTAGATGATAACAAATATATTGGGGATCTCTTGACGGAATTTAGAGCAGCAAAAGATCGAAGTAAAGGAGAAATCTTGCACTGTAAACTGATATTCAAGAAAAAGTTATTTCGAGAGTCAGATGAAGCCGTGACAGATCCGATGTTTGTGCAGTTGTCCTATGTACAAATGCAACATGATTATATTTTGGGTAATTATCCTGTTGGAAAAGATGATGCTGCTCAGCTTTCTGCATTACAAATCTTGGCTGAGATTGGATTTGTTAGCACACCTGAATCATGCACCAACTGGAATTCACTTCTGGAGCGATTCCTTCCCAGACAAATTTCAATGACACGAGCAAAACGTGAATGGGAGTTTGATATTCTCTCTAGATATCGTTCATTGGAGCATCAGACAAAAGATGATGCAAGACAACAATTTCTGCGTATATTGAGAGCACTCCCTTATGGGAATTCAGTTTTCTTCAACGTTCGCAAGATTGATGATCCTATTGGACTATTGCCTGGACGAATAATAATTGGAATCAATAAAAGAGGGATTCATTTTTTTCGTCCAGTTCCTAAGGAATATTTGCACTCGGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGCAATTCAGCAGTCTTTTTCAAAATGCGAGTAGCAGGTGTTCTTCACATATTCCAGTTTGAAACCAAGCAGGGTGAAGAAATTTGTGTAGCTCTTCAGACACATATAAATGATGTAATGCTGCGCCGCTATTCGAAAGCACGATCTTCTAGTGGCGGTAGTTCTTTGAATGGAGATGCTTCTATCAATTCAAAGCCTCCTAATTTAGAATCATATGAGAAGCGCATTCAAGATTTATCAAAACTTGTTGAAGAATCTCAAAGAAGTGCTGATCAATTGCATAAAGATTTGCATGAGAAGCAAGAAAAGGAAGTAAAAATGCAAGAACAATTGGAGGGTTTGAAGGAATCATTAAAAGCTAATAAGCAAAATCTTCAAGCAGTTACAAGTGACTGTGAAAGACTTAGGTCACTATGCAATAAAAAAGATCAGGCGCTACAGGCTATAGAGAGCACTTCCAAAAAGGATCTCGTTGAAACAAACAACCAAGTGCTACAAAAGCTTAAATATGAGCTAAAATATTGTAAAGGTGAGCTGGATTCGGCTGAAGAAACTATCAAAACCTTGAGAAGTGAAAAGGCGATTTTGGAACAGAAGCTATCTGTGCTTGAGAAGAGGAATTCTGAAGAGAGTAGTTCTCTACTACGGAAGCTTGAGCAAGAACGCAAAGCTGTGAAGTCTGAAGTGTATGACCTGGAAAGAAAGATAGAAGGGTATAGACAAGAATTAATGGCTGCTAAGTCTATTATTTCAGTCAAGGACTCTGAATTGTCTGCATTGCAAAATAATTTCAAGGAACTGGAAGAACTGCGAGAAATGAAAGAGGACATTGATAGAAAGAATGAACAGACAGCTTCCATATTGAAGATGCAAAGAGCTCAACTAGCCGAAATGGAAGGTCTTTATAAAGAAGAACAAGTTTTAAGAAAACGATATTTTAATGTAATAGAAGACATGAAAGGCAAGATCAGGGTTTATTGTCGGCTAAGACCTATCAGTGAAAAAGAGGTTTCTGAGAAAGAAAGAGAAGCTGTTACTGCGGTAGATGAATTTACTGTTGAGTTTCTCTGGAAAGATGATAATCCAAAACAGTATATATATGATCGTGTTTTTGGTGGTGATGCCACTCAAGAAACTGTATTTGAGGATACAAGGTATTTGGTGCAATCTGCTGTTGATGGTTATAATGTGTGCATATTTGCTTACGGTCAAACTGGCTCTGGAAAGACATTCACAATCTATGGATCAGAAGACAACCCCGGTCTTACACCTCGTGCAATTGCTGAACTTTTTAGAATTTTAAGGAGAGATAGTAACAAGTATTCCTTTTCCTTGAAGGCATACATGGTGGAATTATATCAAGATACCCTAATAGATCTTCTGTTACCTAAGAATGCAAAGCATTCTCGATTGGATATCAAGAAGGATTCAACGGGAATGGTCGTTGTGGAAAATGTGACAGTGATGTCAATTTCCACAATTGAAGAATTGAATTATATAATACAAAAGGGTTCTGAGCGACGACATATATCTGGGACACAAATGAATGAAGAAAGTTCGAGGTCTCATCTCATTCTTTCAATAGTAGTTGAAAGTACCAACCTTCAAAGTCAGTCAGTTGCAAGGGGAAAGCTGAGTTTTGTTGATCTTGCTGGTTCAGAAAGAGTGAAAAAGTCCGGTTCTATGGGTAGTCAACTCAAAGAAGCACAAAGTATCAACAAATCCTTATCAGCACTTGGAGATGTTATAAGTGCTTTATCTTCTGGTGGCCAACACACACCTTACAGGAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGTGGTAATGCCAAAACTCTCATGTTTGTCAATGTCTCTCCAATAGAATCAAGCTTGGATGAGACTCATAACTCTCTCATGTACGCATCACGAGTAAGATCGATTGTGAATGACCCCAGCAAAAATGTTAGTTCAAAAGAAATTGCGCGATTAAAGAAGTTGGTTACATATTGGAAACAACAAGCTGGAAGAGCAATTGAGCATGAAGATTTAGAAGAAATTCAAGATGAACGACCAAACAAGGAGAGACCAGATAGTCATGGTAGCTCTAGCTCTAGGTAA 3765 0.3841 MIIDRPPSMAQNPMTSRSSFSSNNGNENTNVNNHAAANNADGYDSDSSNLATPTPSTLSMTVPAELAGAIPLIDRFQVDGFLKLMHKQIQSAGKRGFFSKRSSDPQAREKFTFEDMLSFQKDPIPTALLKINGDLVSRATKLFQIILKYIGVDSSDCTTPLSLDERVELVGKLYKQSLKRAELRDELFVQISKQTRNNPDRQYLIKSWELMYVCASSMSPSKDIAIYLSEYVHNIANDVATDSEIQALALNTFNALKRSVKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMSTTVADAVEELAGLIKLSTYSSFSLFECRKVVTSSKSPDPVNEEYIGLDDNKYIGDLLTEFRAAKDRSKGEILHCKLIFKKKLFRESDEAVTDPMFVQLSYVQMQHDYILGNYPVGKDDAAQLSALQILAEIGFVSTPESCTNWNSLLERFLPRQISMTRAKREWEFDILSRYRSLEHQTKDDARQQFLRILRALPYGNSVFFNVRKIDDPIGLLPGRIIIGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNSAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSSSGGSSLNGDASINSKPPNLESYEKRIQDLSKLVEESQRSADQLHKDLHEKQEKEVKMQEQLEGLKESLKANKQNLQAVTSDCERLRSLCNKKDQALQAIESTSKKDLVETNNQVLQKLKYELKYCKGELDSAEETIKTLRSEKAILEQKLSVLEKRNSEESSSLLRKLEQERKAVKSEVYDLERKIEGYRQELMAAKSIISVKDSELSALQNNFKELEELREMKEDIDRKNEQTASILKMQRAQLAEMEGLYKEEQVLRKRYFNVIEDMKGKIRVYCRLRPISEKEVSEKEREAVTAVDEFTVEFLWKDDNPKQYIYDRVFGGDATQETVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSEDNPGLTPRAIAELFRILRRDSNKYSFSLKAYMVELYQDTLIDLLLPKNAKHSRLDIKKDSTGMVVVENVTVMSISTIEELNYIIQKGSERRHISGTQMNEESSRSHLILSIVVESTNLQSQSVARGKLSFVDLAGSERVKKSGSMGSQLKEAQSINKSLSALGDVISALSSGGQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPIESSLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVTYWKQQAGRAIEHEDLEEIQDERPNKERPDSHGSSSSR* 1255
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2278 1254 SMART B41_5 279 503 IPR019749 -
Mtr8g2278 1254 CDD FERM_C_KCBP 500 601 - -
Mtr8g2278 1254 Gene3D - 501 609 IPR011993 -
Mtr8g2278 1254 Gene3D MyTH4 domain 97 280 IPR038185 -
Mtr8g2278 1254 MobiDBLite consensus disorder prediction 9 56 - -
Mtr8g2278 1254 Coils Coil 718 759 - -
Mtr8g2278 1254 Coils Coil 803 840 - -
Mtr8g2278 1254 PANTHER KINESIN-RELATED 599 1254 IPR027640 GO:0003777|GO:0007018
Mtr8g2278 1254 MobiDBLite consensus disorder prediction 1 56 - -
Mtr8g2278 1254 Pfam FERM central domain 389 503 IPR019748 -
Mtr8g2278 1254 Coils Coil 622 684 - -
Mtr8g2278 1254 MobiDBLite consensus disorder prediction 602 623 - -
Mtr8g2278 1254 Gene3D Kinesin motor domain 817 1197 IPR036961 -
Mtr8g2278 1254 CDD FERM_B-lobe 398 496 IPR019748 -
Mtr8g2278 1254 PRINTS Kinesin heavy chain signature 947 968 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr8g2278 1254 PRINTS Kinesin heavy chain signature 1066 1083 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr8g2278 1254 PRINTS Kinesin heavy chain signature 1097 1115 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr8g2278 1254 PRINTS Kinesin heavy chain signature 1146 1167 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr8g2278 1254 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Mtr8g2278 1254 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 599 1254 - -
Mtr8g2278 1254 MobiDBLite consensus disorder prediction 1227 1254 - -
Mtr8g2278 1254 ProSiteProfiles Kinesin motor domain profile. 875 1196 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr8g2278 1254 SMART kinesin_4 873 1204 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr8g2278 1254 Gene3D - 395 496 IPR014352 -
Mtr8g2278 1254 SUPERFAMILY PH domain-like 503 591 - -
Mtr8g2278 1254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 875 1223 IPR027417 -
Mtr8g2278 1254 Pfam Kinesin motor domain 881 1196 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr8g2278 1254 SUPERFAMILY Second domain of FERM 381 498 IPR035963 -
Mtr8g2278 1254 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Mtr8g2278 1254 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Mtr8g2278 1254 CDD KISc_C_terminal 873 1198 - -
Mtr8g2278 1254 SUPERFAMILY Prismane protein-like 818 879 IPR011254 GO:0003824|GO:0016491
Mtr8g2278 1254 Coils Coil 761 795 - -
Mtr8g2278 1254 Gene3D - 1199 1247 - -
Mtr8g2278 1254 ProSiteProfiles FERM domain profile. 283 597 IPR000299 GO:0005856
Mtr8g2278 1254 ProSitePatterns Kinesin motor domain signature. 1096 1107 IPR019821 GO:0003777|GO:0005524|GO:0007018
Mtr8g2278 1254 Gene3D - 282 386 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr8g2278 Mtr-Chr8 33076280 33085544 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2278 29 1247 Calmodulin-binding Proteins AT5G65930 70.857 0.0 1790
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2278 - - gmx:100807481 1991.47
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2278 8 33076280 33085544 Mtr8g2278 8 33076280 33085544 ECH
Mtr5g1017 5 10175249 10183580 Mtr8g2278 8 33076280 33085544 PCT