Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr8g2278 | ATGATCATTGATAGGCCACCATCCATGGCTCAAAATCCTATGACAAGCAGATCTTCTTTTAGCTCTAACAATGGCAATGAGAATACCAATGTGAACAACCATGCTGCTGCTAACAATGCTGATGGCTATGATAGTGATAGCTCAAATTTGGCAACACCCACACCGTCTACTCTGTCTATGACTGTTCCAGCAGAACTCGCTGGAGCTATACCCTTAATCGACAGATTTCAGGTGGATGGATTTTTAAAGCTGATGCATAAACAAATTCAATCTGCTGGGAAACGTGGATTTTTTTCTAAAAGATCTTCAGATCCCCAAGCTCGTGAAAAATTTACATTTGAGGACATGCTGTCTTTTCAAAAGGATCCAATACCAACAGCGCTGCTTAAAATTAATGGTGATTTAGTAAGTCGAGCGACAAAGTTATTCCAGATAATTTTGAAATATATTGGAGTTGATTCGTCTGATTGCACAACTCCATTAAGCTTGGATGAACGAGTTGAGCTTGTCGGCAAACTATACAAGCAAAGTTTGAAACGCGCAGAACTCCGAGACGAGCTTTTTGTTCAGATATCAAAACAAACAAGAAATAACCCTGATAGGCAATACTTGATCAAATCATGGGAGCTTATGTATGTATGTGCATCCTCTATGTCTCCAAGTAAAGACATTGCCATTTATCTGTCAGAATACGTTCATAACATAGCAAATGATGTAGCTACTGATTCTGAGATCCAAGCCCTTGCGTTAAATACGTTTAATGCTTTGAAGCGTTCTGTTAAGGCTGGTCCTAGACATATAATACCTGGGCGAGAAGAGATTGAAGCTTTGTTGACTGGGAGGAAGCTTACAACTATAGTGTTCTTCTTAGATGAAACTTTTGAAGAAATTACATATGACATGTCAACAACAGTTGCTGATGCTGTCGAGGAACTTGCGGGGCTCATTAAACTGTCAACATACTCTAGCTTTAGTCTGTTTGAATGTCGTAAAGTTGTTACAAGTTCCAAATCACCTGATCCTGTGAACGAGGAGTACATTGGATTAGATGATAACAAATATATTGGGGATCTCTTGACGGAATTTAGAGCAGCAAAAGATCGAAGTAAAGGAGAAATCTTGCACTGTAAACTGATATTCAAGAAAAAGTTATTTCGAGAGTCAGATGAAGCCGTGACAGATCCGATGTTTGTGCAGTTGTCCTATGTACAAATGCAACATGATTATATTTTGGGTAATTATCCTGTTGGAAAAGATGATGCTGCTCAGCTTTCTGCATTACAAATCTTGGCTGAGATTGGATTTGTTAGCACACCTGAATCATGCACCAACTGGAATTCACTTCTGGAGCGATTCCTTCCCAGACAAATTTCAATGACACGAGCAAAACGTGAATGGGAGTTTGATATTCTCTCTAGATATCGTTCATTGGAGCATCAGACAAAAGATGATGCAAGACAACAATTTCTGCGTATATTGAGAGCACTCCCTTATGGGAATTCAGTTTTCTTCAACGTTCGCAAGATTGATGATCCTATTGGACTATTGCCTGGACGAATAATAATTGGAATCAATAAAAGAGGGATTCATTTTTTTCGTCCAGTTCCTAAGGAATATTTGCACTCGGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGCAATTCAGCAGTCTTTTTCAAAATGCGAGTAGCAGGTGTTCTTCACATATTCCAGTTTGAAACCAAGCAGGGTGAAGAAATTTGTGTAGCTCTTCAGACACATATAAATGATGTAATGCTGCGCCGCTATTCGAAAGCACGATCTTCTAGTGGCGGTAGTTCTTTGAATGGAGATGCTTCTATCAATTCAAAGCCTCCTAATTTAGAATCATATGAGAAGCGCATTCAAGATTTATCAAAACTTGTTGAAGAATCTCAAAGAAGTGCTGATCAATTGCATAAAGATTTGCATGAGAAGCAAGAAAAGGAAGTAAAAATGCAAGAACAATTGGAGGGTTTGAAGGAATCATTAAAAGCTAATAAGCAAAATCTTCAAGCAGTTACAAGTGACTGTGAAAGACTTAGGTCACTATGCAATAAAAAAGATCAGGCGCTACAGGCTATAGAGAGCACTTCCAAAAAGGATCTCGTTGAAACAAACAACCAAGTGCTACAAAAGCTTAAATATGAGCTAAAATATTGTAAAGGTGAGCTGGATTCGGCTGAAGAAACTATCAAAACCTTGAGAAGTGAAAAGGCGATTTTGGAACAGAAGCTATCTGTGCTTGAGAAGAGGAATTCTGAAGAGAGTAGTTCTCTACTACGGAAGCTTGAGCAAGAACGCAAAGCTGTGAAGTCTGAAGTGTATGACCTGGAAAGAAAGATAGAAGGGTATAGACAAGAATTAATGGCTGCTAAGTCTATTATTTCAGTCAAGGACTCTGAATTGTCTGCATTGCAAAATAATTTCAAGGAACTGGAAGAACTGCGAGAAATGAAAGAGGACATTGATAGAAAGAATGAACAGACAGCTTCCATATTGAAGATGCAAAGAGCTCAACTAGCCGAAATGGAAGGTCTTTATAAAGAAGAACAAGTTTTAAGAAAACGATATTTTAATGTAATAGAAGACATGAAAGGCAAGATCAGGGTTTATTGTCGGCTAAGACCTATCAGTGAAAAAGAGGTTTCTGAGAAAGAAAGAGAAGCTGTTACTGCGGTAGATGAATTTACTGTTGAGTTTCTCTGGAAAGATGATAATCCAAAACAGTATATATATGATCGTGTTTTTGGTGGTGATGCCACTCAAGAAACTGTATTTGAGGATACAAGGTATTTGGTGCAATCTGCTGTTGATGGTTATAATGTGTGCATATTTGCTTACGGTCAAACTGGCTCTGGAAAGACATTCACAATCTATGGATCAGAAGACAACCCCGGTCTTACACCTCGTGCAATTGCTGAACTTTTTAGAATTTTAAGGAGAGATAGTAACAAGTATTCCTTTTCCTTGAAGGCATACATGGTGGAATTATATCAAGATACCCTAATAGATCTTCTGTTACCTAAGAATGCAAAGCATTCTCGATTGGATATCAAGAAGGATTCAACGGGAATGGTCGTTGTGGAAAATGTGACAGTGATGTCAATTTCCACAATTGAAGAATTGAATTATATAATACAAAAGGGTTCTGAGCGACGACATATATCTGGGACACAAATGAATGAAGAAAGTTCGAGGTCTCATCTCATTCTTTCAATAGTAGTTGAAAGTACCAACCTTCAAAGTCAGTCAGTTGCAAGGGGAAAGCTGAGTTTTGTTGATCTTGCTGGTTCAGAAAGAGTGAAAAAGTCCGGTTCTATGGGTAGTCAACTCAAAGAAGCACAAAGTATCAACAAATCCTTATCAGCACTTGGAGATGTTATAAGTGCTTTATCTTCTGGTGGCCAACACACACCTTACAGGAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGTGGTAATGCCAAAACTCTCATGTTTGTCAATGTCTCTCCAATAGAATCAAGCTTGGATGAGACTCATAACTCTCTCATGTACGCATCACGAGTAAGATCGATTGTGAATGACCCCAGCAAAAATGTTAGTTCAAAAGAAATTGCGCGATTAAAGAAGTTGGTTACATATTGGAAACAACAAGCTGGAAGAGCAATTGAGCATGAAGATTTAGAAGAAATTCAAGATGAACGACCAAACAAGGAGAGACCAGATAGTCATGGTAGCTCTAGCTCTAGGTAA | 3765 | 0.3841 | MIIDRPPSMAQNPMTSRSSFSSNNGNENTNVNNHAAANNADGYDSDSSNLATPTPSTLSMTVPAELAGAIPLIDRFQVDGFLKLMHKQIQSAGKRGFFSKRSSDPQAREKFTFEDMLSFQKDPIPTALLKINGDLVSRATKLFQIILKYIGVDSSDCTTPLSLDERVELVGKLYKQSLKRAELRDELFVQISKQTRNNPDRQYLIKSWELMYVCASSMSPSKDIAIYLSEYVHNIANDVATDSEIQALALNTFNALKRSVKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMSTTVADAVEELAGLIKLSTYSSFSLFECRKVVTSSKSPDPVNEEYIGLDDNKYIGDLLTEFRAAKDRSKGEILHCKLIFKKKLFRESDEAVTDPMFVQLSYVQMQHDYILGNYPVGKDDAAQLSALQILAEIGFVSTPESCTNWNSLLERFLPRQISMTRAKREWEFDILSRYRSLEHQTKDDARQQFLRILRALPYGNSVFFNVRKIDDPIGLLPGRIIIGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNSAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSSSGGSSLNGDASINSKPPNLESYEKRIQDLSKLVEESQRSADQLHKDLHEKQEKEVKMQEQLEGLKESLKANKQNLQAVTSDCERLRSLCNKKDQALQAIESTSKKDLVETNNQVLQKLKYELKYCKGELDSAEETIKTLRSEKAILEQKLSVLEKRNSEESSSLLRKLEQERKAVKSEVYDLERKIEGYRQELMAAKSIISVKDSELSALQNNFKELEELREMKEDIDRKNEQTASILKMQRAQLAEMEGLYKEEQVLRKRYFNVIEDMKGKIRVYCRLRPISEKEVSEKEREAVTAVDEFTVEFLWKDDNPKQYIYDRVFGGDATQETVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSEDNPGLTPRAIAELFRILRRDSNKYSFSLKAYMVELYQDTLIDLLLPKNAKHSRLDIKKDSTGMVVVENVTVMSISTIEELNYIIQKGSERRHISGTQMNEESSRSHLILSIVVESTNLQSQSVARGKLSFVDLAGSERVKKSGSMGSQLKEAQSINKSLSALGDVISALSSGGQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPIESSLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVTYWKQQAGRAIEHEDLEEIQDERPNKERPDSHGSSSSR* | 1255 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr8g2278 | 1254 | SMART | B41_5 | 279 | 503 | IPR019749 | - | |
Mtr8g2278 | 1254 | CDD | FERM_C_KCBP | 500 | 601 | - | - | |
Mtr8g2278 | 1254 | Gene3D | - | 501 | 609 | IPR011993 | - | |
Mtr8g2278 | 1254 | Gene3D | MyTH4 domain | 97 | 280 | IPR038185 | - | |
Mtr8g2278 | 1254 | MobiDBLite | consensus disorder prediction | 9 | 56 | - | - | |
Mtr8g2278 | 1254 | Coils | Coil | 718 | 759 | - | - | |
Mtr8g2278 | 1254 | Coils | Coil | 803 | 840 | - | - | |
Mtr8g2278 | 1254 | PANTHER | KINESIN-RELATED | 599 | 1254 | IPR027640 | GO:0003777|GO:0007018 | |
Mtr8g2278 | 1254 | MobiDBLite | consensus disorder prediction | 1 | 56 | - | - | |
Mtr8g2278 | 1254 | Pfam | FERM central domain | 389 | 503 | IPR019748 | - | |
Mtr8g2278 | 1254 | Coils | Coil | 622 | 684 | - | - | |
Mtr8g2278 | 1254 | MobiDBLite | consensus disorder prediction | 602 | 623 | - | - | |
Mtr8g2278 | 1254 | Gene3D | Kinesin motor domain | 817 | 1197 | IPR036961 | - | |
Mtr8g2278 | 1254 | CDD | FERM_B-lobe | 398 | 496 | IPR019748 | - | |
Mtr8g2278 | 1254 | PRINTS | Kinesin heavy chain signature | 947 | 968 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Mtr8g2278 | 1254 | PRINTS | Kinesin heavy chain signature | 1066 | 1083 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Mtr8g2278 | 1254 | PRINTS | Kinesin heavy chain signature | 1097 | 1115 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Mtr8g2278 | 1254 | PRINTS | Kinesin heavy chain signature | 1146 | 1167 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Mtr8g2278 | 1254 | ProSiteProfiles | MyTH4 domain profile. | 119 | 278 | IPR000857 | GO:0005856 | |
Mtr8g2278 | 1254 | PANTHER | KINESIN-LIKE CALMODULIN-BINDING PROTEIN | 599 | 1254 | - | - | |
Mtr8g2278 | 1254 | MobiDBLite | consensus disorder prediction | 1227 | 1254 | - | - | |
Mtr8g2278 | 1254 | ProSiteProfiles | Kinesin motor domain profile. | 875 | 1196 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Mtr8g2278 | 1254 | SMART | kinesin_4 | 873 | 1204 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Mtr8g2278 | 1254 | Gene3D | - | 395 | 496 | IPR014352 | - | |
Mtr8g2278 | 1254 | SUPERFAMILY | PH domain-like | 503 | 591 | - | - | |
Mtr8g2278 | 1254 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 875 | 1223 | IPR027417 | - | |
Mtr8g2278 | 1254 | Pfam | Kinesin motor domain | 881 | 1196 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Mtr8g2278 | 1254 | SUPERFAMILY | Second domain of FERM | 381 | 498 | IPR035963 | - | |
Mtr8g2278 | 1254 | SMART | MyTH4_1 | 119 | 278 | IPR000857 | GO:0005856 | |
Mtr8g2278 | 1254 | Pfam | MyTH4 domain | 172 | 276 | IPR000857 | GO:0005856 | |
Mtr8g2278 | 1254 | CDD | KISc_C_terminal | 873 | 1198 | - | - | |
Mtr8g2278 | 1254 | SUPERFAMILY | Prismane protein-like | 818 | 879 | IPR011254 | GO:0003824|GO:0016491 | |
Mtr8g2278 | 1254 | Coils | Coil | 761 | 795 | - | - | |
Mtr8g2278 | 1254 | Gene3D | - | 1199 | 1247 | - | - | |
Mtr8g2278 | 1254 | ProSiteProfiles | FERM domain profile. | 283 | 597 | IPR000299 | GO:0005856 | |
Mtr8g2278 | 1254 | ProSitePatterns | Kinesin motor domain signature. | 1096 | 1107 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Mtr8g2278 | 1254 | Gene3D | - | 282 | 386 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr8g2278 | Mtr-Chr8 | 33076280 | 33085544 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr8g2278 | 29 | 1247 | Calmodulin-binding Proteins | AT5G65930 | 70.857 | 0.0 | 1790 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr8g2278 | - | - | gmx:100807481 | 1991.47 |