Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2276 ATGGTCTTTGGCAAAACCTCCGGCGGCAAAAGCACCCTCCGTATCTCATCTTCCCTCCAAGATCTCACCTCCTACCGCCACCTCAATCCACAAGATCCAATCTCCACCGTCCATCCAATCACCCAACACCAACAACAACAACAACTTCTCCCAAATTCAACTTTCTCCAAAACCAAACCACCTCAAACTCAAAGCCCAGCCCGCAAAAAATGGTCCCGGCCCATTACCCTCATCTTCTGCCTCCTCTTCCTCATCCTCATCATCTACACAATTTACTCTCACCACCAATCTTCATCTAATAAATACTACGTCGTTTTGGATTCTGGTAGCACCGGTACACGTGTCTATGTTTACAAAGCTGAAATTCAAACTCAAAAAAACGAACACACTTCACTTCCGATTTCGGTTACTTCATTGCGAAACGGGTTAAAGAAAAAATCCGGTTCGCAGAGTGGTCGTGCTTATGATCGTATGGAAACTGAACCGGGTTTAGATAAACTGGTTCATAATGTTACCGGTTTAAAAGGCGCTTTGAAACCGCTCTTAAAATGGGCTATGAAGCAAATTCCTGAAGATTTTCATAAAAGCACTTCTCTTTTTTTATATGCTACTGCTGGTGTTAGGAGATTACCAAATGAAGATTCGAAATGGTTACTTGATAATGCGTGGAATGTTGTTAGGAAAAGTTCCGGTTTTGCTTGTAGGAAAGATTGGGTTAAGATTATTAGTGGGACTGAAGAAGCTTATTTTGGGTGGATTGCTTTGAATTATGATAGTGGGATTTTGGGGGTTAAGCCTAGGAAAGATACTTATGGTGCACTTGATTTAGGTGGGTCGAGTTTGCAAGTTACATTTGAAAGCGATCAAGAACGTTTGAATGGGGAAACTAGTTTGTTTGTTAGGATTGGTGATGTTAATCATCATTTAACGGCGTATTCTTTAGCTGGGTATGGTCTTAATGAAGCATTTGATAAATCGGTTGCATATGTTTTTAAGAAAGGGAAAGTTGGTTTAGGTGGAGTTGTTAAACATCCTTGTTTGCAAAATGGGTTTAAGAATCAGTATACGTGTTCTCGGTGTTTGGTTGGTGAGAGAGGGAATGGAGGGGAGAGTCCGAAAGTTAATGGGAGCGGGAGTGGGAATGTTGTTGGTGGTGGTGGGAAAGTAGTGATGAAGACACCGGTGACTCTTGTAGGTGCGCCAAATTGGCAAGAGTGTAGCGCGATTGCTAAGGTGGCTGTTAATTTGTCGGAATGGTCTGATGTTGGTCAGGGTCTTGATTGTGAAGTGAATCCTTGTGCTTTGCGAGAGAATCTTCCTCGCCCATTGGGTCATTTTTATGTGATTTCGGGGTTTTTTGTGGTGTATAGGTTTTTCAATTTGACTTCTGAGGCTACTATTGATGATGTGTTGGAAAAGGGTAGGGAGTTTTGTGAAAAAAAATGGGACGTGGCTAAGAAAAGTGTTGCTCCACAGCCTTTTATCGAGCAATATTGTTTCAGGGGGCCTTATGTTGCGTCTTTGCTGAGAGAGGGTTTGCATATTACAGATAGACATATAACTGTTGGCTCTGGAAGTATCACTTGGACGCTTGGGGTGGCTTTGTTGGAAGCTGGGAAGTCTTATTCGACCAGATTTGGGCTTCGTGGATTTGACTTGGTTCAGATGAAGATGAATCCTCTGATTCTTATTCCCATTTTGTTACTTTCTCTTATTCTTTTATGTTGCGCTTTATCATGTGTCCTCAAATGGGTGCCAAGATTTTTCCGGAGGCAATACCTTCCCCTTTTCAGGCATAACACCACGTCCAGTTCATCTGTTCTTAATATCCCGTCTCCTTTATGGTTCAAGAGTTGGAGTCCAATTATTTCTGGAGAGTCAAGAACAAAGACACCACTCAGCCCAACTATCGCAGGTTCACAAGATAGACCATTTAGCCTGGGACATGGTCTTGGTGATAACAGTGCAGGCATCCAGATGATGGAATCTTCCTTTTACCCGGCAGCTAGTAGTGTCTCGCACAGTTATTCCTCTACCAATTTAGGGCAGATGCCGTTTGACAGTAGTAATATAGGGACCTTCTGGAAGCCCCACAGAAGTCAGATGCGTCTGCAGAGTAGAAGATCGCAATCTCGAGAAGACTTGAATTCGTCAGTGGCTGATGCACACATGGTGAATGTTTAG 2184 0.4295 MVFGKTSGGKSTLRISSSLQDLTSYRHLNPQDPISTVHPITQHQQQQQLLPNSTFSKTKPPQTQSPARKKWSRPITLIFCLLFLILIIYTIYSHHQSSSNKYYVVLDSGSTGTRVYVYKAEIQTQKNEHTSLPISVTSLRNGLKKKSGSQSGRAYDRMETEPGLDKLVHNVTGLKGALKPLLKWAMKQIPEDFHKSTSLFLYATAGVRRLPNEDSKWLLDNAWNVVRKSSGFACRKDWVKIISGTEEAYFGWIALNYDSGILGVKPRKDTYGALDLGGSSLQVTFESDQERLNGETSLFVRIGDVNHHLTAYSLAGYGLNEAFDKSVAYVFKKGKVGLGGVVKHPCLQNGFKNQYTCSRCLVGERGNGGESPKVNGSGSGNVVGGGGKVVMKTPVTLVGAPNWQECSAIAKVAVNLSEWSDVGQGLDCEVNPCALRENLPRPLGHFYVISGFFVVYRFFNLTSEATIDDVLEKGREFCEKKWDVAKKSVAPQPFIEQYCFRGPYVASLLREGLHITDRHITVGSGSITWTLGVALLEAGKSYSTRFGLRGFDLVQMKMNPLILIPILLLSLILLCCALSCVLKWVPRFFRRQYLPLFRHNTTSSSSVLNIPSPLWFKSWSPIISGESRTKTPLSPTIAGSQDRPFSLGHGLGDNSAGIQMMESSFYPAASSVSHSYSSTNLGQMPFDSSNIGTFWKPHRSQMRLQSRRSQSREDLNSSVADAHMVNV* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2276 727 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 36 699 IPR000407 GO:0016787
Mtr8g2276 727 Gene3D - 89 243 - -
Mtr8g2276 727 MobiDBLite consensus disorder prediction 698 727 - -
Mtr8g2276 727 MobiDBLite consensus disorder prediction 711 727 - -
Mtr8g2276 727 Pfam GDA1/CD39 (nucleoside phosphatase) family 96 537 IPR000407 GO:0016787
Mtr8g2276 727 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 36 699 - -
Mtr8g2276 727 Gene3D Exopolyphosphatase. Domain 2 244 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2276 Mtr-Chr8 33048872 33056244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2276 8 727 Nodulin-like Gene Family AT4G19180 55.616 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2276 - - lja:Lj0g3v0174799.1 978.008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1029 5 10277790 10282056 Mtr8g2276 8 33048872 33056244 PCT