Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2275 ATGGGACTTGGTGGTGATATATGGAAAGCACACTCAGCGATGGCAGTTGTGCAATTATTCACAGGAGGTTATCATGTTATCACCAAATTGGCTCTTAATGTTGGTGTTAATCAAATCGTTTTTTGTGTTTTTCGTGATCTTCTTGCTCTCTCTATTCTTGCTCCCATCGCTTTTTTCCGTGAAAGACGTACAAGGCCACCCCTAACCAAGAGCTTAGTGACATCATTTTTCTTTCTCGGATTAACTGGGATATTTGGAAATCATCTTTTGTTTCTTATTGGTTTGAGCTATACTAATCCAACTTATGCTGCTGCAATTCAGCCAGCTACTCCCGTCTTTACATTCTTGTTGGCTATAATGATGGGTACAGAAAGAGTGAACTTGCTAAGATATGAAGGTCTGGCCAAGGTTGGAGGAATTTTGGTATGTGTTCTGGGTGCCTTGGTGATGGTTTTGTACCGTGGTCCGGCACTGGTAGGATATTCAGAAATGGACCTTATATCACACAGTGAAATAACTGCAAGAGGTCAACCAGAGCCATCTGGATGGTTAGTTAGTGGTTTAATGAATCTTGGATTAGACCATTTTCATGTTGGGGTTCTGTGCTTAATAGGAAACTGCATGTGCATGGCTACTTTTCTATCCATTCAGGCTCCAATATTAAAGAAGTATCCTGCAAACCTATCTGTCACAGCATATTCATACTTCTTTGGAGCTTTACTGATGGTAACTACATCATACTTCGTGACCGATGAATCAACTGATTGGAGTTTGACACAGTCTGAAACATTTGCTGTTTTATATGCTGGAATTATTGCATCTGCCCTTAACTATGGAATCATCACATGGAGCAACAAGATCTTGGGCCCAGCCATGGTTGCCCTTTATAATCCACTTCAACCTGGGGCTGCTGCTCTTCTGTCTAGAATTTTTATTGGAAGTCCGATTTACATGGGAAGTGTCTTGGGTGGATCTCTAATCATCACTGGTCTGTACGCGGTTACATGGGCATCATATAGGGAAAGACAGGCAGCTGCCGGAGTTATTCCTCATCATAGCTCTAAAAGGGTCGCTGAATCACTTCACAAAACTTCATTTCCTAGAGTTAACATTTTCTCAGGCTTATCTACAAAGCCTTCGGATTGA 1146 0.4154 MGLGGDIWKAHSAMAVVQLFTGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPIAFFRERRTRPPLTKSLVTSFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPATPVFTFLLAIMMGTERVNLLRYEGLAKVGGILVCVLGALVMVLYRGPALVGYSEMDLISHSEITARGQPEPSGWLVSGLMNLGLDHFHVGVLCLIGNCMCMATFLSIQAPILKKYPANLSVTAYSYFFGALLMVTTSYFVTDESTDWSLTQSETFAVLYAGIIASALNYGIITWSNKILGPAMVALYNPLQPGAAALLSRIFIGSPIYMGSVLGGSLIITGLYAVTWASYRERQAAAGVIPHHSSKRVAESLHKTSFPRVNIFSGLSTKPSD* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2275 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 340 - -
Mtr8g2275 381 PANTHER WAT1-RELATED PROTEIN 9 361 IPR030184 GO:0016021|GO:0022857
Mtr8g2275 381 Pfam EamA-like transporter family 198 335 IPR000620 GO:0016020|GO:0016021
Mtr8g2275 381 Pfam EamA-like transporter family 14 151 IPR000620 GO:0016020|GO:0016021
Mtr8g2275 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 154 - -
Mtr8g2275 381 PANTHER WAT1-RELATED PROTEIN 9 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2275 Mtr-Chr8 33040607 33045168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2275 93 359 Nodulin-like Gene Family AT5G45370 65.799 6.39e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2275 - - gmx:100809051 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2275 8 33040607 33045168 Mtr8g2275 8 33040607 33045168 ECH
Mtr5g1033 5 10312365 10317467 Mtr8g2275 8 33040607 33045168 PCT