Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2262 ATGGAGAGTTCAAGAATCATAAAATGGTTAAGTACTCTACTATGTGCCCTGCTATTCCTAAAGACACAAGGACAGTATGTTCCATTGACTAGGCTCGAAAGTGCGGTATCGAAAGGAGCTGTGTGTTTGGATGGAAGCCCCCCAGCTTACCATTTTGATCAAGGACATGATGAAGGAGCTAACAATTGGATTGTTCACATTGAGGGAGGTGGATGGTGCCATAATGTAACGTATTGCCTTTATCGGAGGGACAGTCGATTAGGTTCGTCGCATGAAATGGAAGAGCAAACTTACTTTTCTGGATATTTAAGTGACAACCAACAATATAATCCAGATTTCTACAATTGGAATAGAGTCAAGGTTAGGTATTGTGACGGATCATCATTTACCGGCGATGTTGAAGAAGTTGATCCAACGACGAAGTTATACTACAGAGGTGCAAGGATTTTTTCTGCTGTAATGGAAGAGTTACTAGCAAAAGGAATGGATCATGCTGAAAATGCTATTCTTTCTGGATGTTCTGCTGGAGGATTAACTACTATATTACACTGTGACGGATTTCGAGCACTATTTCCTAATGAAACTAGAGTGAAATGTGTCTCAGATGCTGGTTATTTTGTTAATGTAAATGATATCTCAGGAGATCATTACATTGAAGATTACTACAGTCAAGTTGTTGCAACACATGGCTCAGAAAAGAGTTTGCCTTCATCCTGCACTTCAATGCTCAGTCCAGGACTGTGCTTTTTCCCGCAATATATGGCATCAAGTATACAAACACCAATCTTCATTGTAAACGCAGCATATGACTCATGGCAGATCAAAAACATTTTGGCACCTGGTGATGCTGATCCCGACGGCCAATGGCGTAGCTGCAAGACCAATCTAAACAACTGCTCACCTGAACAGCTAAATATAATGCAAGACTATAGAACACAATTCTTAGAGGCATTGAGTCCTATAAGCAATTCTCCATCTAATGGAATGTTCATAGACTCTTGCTATGTCCACTGCCAAACAGAACCGCAGGAAACATGGTTTAAAAGCGACTCTCCAATGGTTGGCAATAAAACAGTTGCAAAGGCAGTAGGAGACTGGTTTTATGAAAGAAGTCCTTCACGTGAGATAGACTGTACTTACCCTTGCAACCCTACTTGTCAGAACCGTGTTTGGGAGTCAGCAACTGCATCATACCCAGCAATGTACACTAGAGTCTACTAA 1221 0.4111 MESSRIIKWLSTLLCALLFLKTQGQYVPLTRLESAVSKGAVCLDGSPPAYHFDQGHDEGANNWIVHIEGGGWCHNVTYCLYRRDSRLGSSHEMEEQTYFSGYLSDNQQYNPDFYNWNRVKVRYCDGSSFTGDVEEVDPTTKLYYRGARIFSAVMEELLAKGMDHAENAILSGCSAGGLTTILHCDGFRALFPNETRVKCVSDAGYFVNVNDISGDHYIEDYYSQVVATHGSEKSLPSSCTSMLSPGLCFFPQYMASSIQTPIFIVNAAYDSWQIKNILAPGDADPDGQWRSCKTNLNNCSPEQLNIMQDYRTQFLEALSPISNSPSNGMFIDSCYVHCQTEPQETWFKSDSPMVGNKTVAKAVGDWFYERSPSREIDCTYPCNPTCQNRVWESATASYPAMYTRVY* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2262 406 PANTHER NOTUM-RELATED 4 395 IPR004963 GO:0016787
Mtr8g2262 406 PANTHER PECTIN ACETYLESTERASE 4 395 - -
Mtr8g2262 406 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
Mtr8g2262 406 SUPERFAMILY alpha/beta-Hydrolases 58 272 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2262 Mtr-Chr8 32857127 32860665 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2262 5 396 Carbohydrate Esterase AT4G19420 55.269 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2262 K19882 - gmx:100780707 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2262 8 32857127 32860665 Mtr8g2262 8 32857127 32860665 ECH
Mtr5g1081 5 10817913 10821124 Mtr8g2262 8 32857127 32860665 PCT