Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2261 ATGAAGTTTATAAGAATGGACCAATTATTCAGTCTTGTAATATGTACACTTCTATTACTAAAAGCAGCAGAAGGGGTTACTGTGCCAATCACTTTTGTTCAAAGTGCAGTGGCAAAAGGAGCTGTTTGTTTGGATGGTAGTCCACCAGCTTACCACTTTGATAAGGGATTTGAAGCTGGAATTGACAACTGGATTGTTCACTTTGAGGGAGGAGGATGGTGCAACAATGCAACTACTTGCCTTGACCGGATCGACACTCGTTTAGGATCATCGAAGAAAATGGATAAGACACTTTCCTTTTCTGGATTTTTTAGTAGCGGCAAAAAGTTTAATCCAGATTTCTATAATTGGAACAGAATCAAGGTTAGGTATTGTGATGGTTCTTCATTTACCGGCGATGTTGAAGCTGTCGATCCAAAAACCAATTTGCACTACAGAGGAGGAAGGATTTTTGTTGCTGTCATTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTAAAAATGCAATTCTCTCTGGATGTTCAGCTGGAGGATTGACTTCTATTTTACAATGTGATCGCTTCAGAACTTTACTACCTGCAGCAGCTAAAGTGAAATGTGTCTCAGATGCTGGTTATTTTATCAATGTAAAGGCTGTCTCCGGAGCATCACACATCGAACAATTCTACAGTCAAGTTGTTCAAACACATGGCTCAGCAAAGAATTTGCCTTCATCTTGTACTTCAAGACTCTCACCAGGGCTGTGTTTTTTCCCCCAAAACGTGGCCGCACAAATCAAAACACCGATCTTCTTTGTAAATGCAGCCTATGATTCATGGCAGATTAAGAACATTTTGGCACCAGGTGTTGCTGATCCTCATGGCACTTGGAGAAACTGCAAGCTTGATATAAAGAGCTGTTCTGCTAATCAATTAAGTACAATGCAAGGTTTCAGGACAGAATTCTTAAAGGCAATTAGTGTGGTTAGTAATTCTCCATCTAAAGGAATGTTTATAGATGGCTGCTATTCCCACTGCCAAACTGGAATGCAGGAAACATGGATGAGAACCGACTCTCCGGTGCTGGCCAAAACAACAATAGCAAAGGCTGTAGGAGATTGGTATTATGATAGAAGCACTTTTCAGCAGATAGATTGTCCTTATCCTTGCAACCCTACTTGTCATAACCGTGTTTTTGAATGA 1182 0.4027 MKFIRMDQLFSLVICTLLLLKAAEGVTVPITFVQSAVAKGAVCLDGSPPAYHFDKGFEAGIDNWIVHFEGGGWCNNATTCLDRIDTRLGSSKKMDKTLSFSGFFSSGKKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPKTNLHYRGGRIFVAVIEDLLAKGMKNAKNAILSGCSAGGLTSILQCDRFRTLLPAAAKVKCVSDAGYFINVKAVSGASHIEQFYSQVVQTHGSAKNLPSSCTSRLSPGLCFFPQNVAAQIKTPIFFVNAAYDSWQIKNILAPGVADPHGTWRNCKLDIKSCSANQLSTMQGFRTEFLKAISVVSNSPSKGMFIDGCYSHCQTGMQETWMRTDSPVLAKTTIAKAVGDWYYDRSTFQQIDCPYPCNPTCHNRVFE* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2261 393 PANTHER NOTUM-RELATED 4 392 IPR004963 GO:0016787
Mtr8g2261 393 Pfam Pectinacetylesterase 23 373 IPR004963 GO:0016787
Mtr8g2261 393 PANTHER PECTIN ACETYLESTERASE 4 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2261 Mtr-Chr8 32845676 32850846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2261 5 392 Carbohydrate Esterase AT4G19420 58.156 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2261 K19882 - gmx:100781246 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2261 8 32845676 32850846 Mtr5g1081 5 10817913 10821124 PCT