Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2259 ATGAGGCCAAGAAACAACAACAACAATAACAGATTCAATTTCAACCTAAATTCCAACAATCTCGAAGAATCACCAAAATCACGTCGAAGAATCACTTTTCTAAATAATCGCGTTTCACTTTTAATGGCGGGACAATCACGGAAATGGATGATCCTTGTCGTTACAATATGGATTCAAGCATTTACAGGGACGAATTTCGATTTTTCGCAATATTCGTCGTCGTTGAAATCTGCTCTTGAAATCTCGCAGGTTCAGCTGAATTATTTGGCTACTGCGAATGATATGGGGAAGATTTTTGGTTGGTCTTCTGGTTTAGCGCTTATGCATCTTCCTGTTTCGGTTGTTATGTTCATTGCTGCGTTTATGGGGTTTCTTGGTTATGGTGTTCAATGGCTTCTCATTAATCATTTCATTTCTTTGCCTTATTTTCTGGTGTTCCTTCTGAGTCTTTTAAGTGGCTGCAGCATATGCTGGTTCAACACAGTATGTTTTATTCTCTGCATTAGGAATTTTCCAGTTAACCGAACACTTGCATTGTCGCTCACTGTGAGTTTCAATGGTGTCAGTGCGGCCCTTTACACCCTTGCTGCAAATTCAATAGATCCATCACCTGACTCGTTGTATCTTCTTTTGAATGCTCTTGTTCCTCTTTTTGTTTGCATTGCAGCGACCATTCCAATTCTTCGCCAACCACCTTTAGACCCTCTCCCTCCTGATGCAGTTAACCGGGACTCGCTAGTATTTCTAATCTTGAACTTCTTAGCCATCTTCACTGGCCTTTATCTCCTTTTGTTTGGCTCATCTGCTTCCTCCATGGCTTCAGCCCGGCTCCACTTTGGTGGAACTGTTCTTCTCCTCATCCTCCCATTGTTTATTCCTGGCATCGTATATGCTCGGGCTTGGGCTCAGCGTACCATCCATTCCAGCTTCCAGGTAGAAGGATCCAGCATTATTCTTATTCATGATGATGATCTTGAGCTGCATAAAGAACTACTTAGCCGCCACAATAGTAGTATTGTTGGCAATGGAGATGGTTACAGCCTGCTAAGTGACAACGGATCCATGTTTTCAAGTCAGAAGGAAAGTGATAGTGATGTGTGTTGTGATAGGATGATTGGCCAGGATCACTTGACAATGCTAGGAGAAGAGCACTCGGCTGCGGTGATTGTCCGCAGATTAGACTTTTGGCTATACTACATCACATACTTCTGTGGAGGTACGATTGGTCTTGTCTATAGCAATAATCTGGGACAGATTGCTCAATCTCTCGGTCTGAAATCAAGTACTTCTTCCCTTGTTACTCTCTATGCATCCTTTTCGTTTTTCGGCCGCTTGCTTTCAGCTGGACCAGATTATGTTCGTAGTAAGTTCTACTTTGCAAGAACTGGTTGGCTCTCCATTGCACTTATACCAACACCAATTGCGTTCTTCTTGCTTGCCGCATCAGACAGTTCTCTGGCACTGCATACTGGAACTGCACTAATTGGGTTGAGTTCTGGTTTCATATTTGCTGCTGCTGTTTCAGTTACATCTGAACTGTTTGGACCCAATAGTGTAGGTGTCAATCACAACATTCTCATAACAAATATCCCAATTGGTTCACTTCTCTATGGTTTTCTTGCTGCACTAGTGTATGATGCCCATGCACACTCAACACCGGGAAACTTGACAACGTCGGACTCAGTAGTTTGCATGGGAAGGCAATGCTACTTCTGGACATTTATCTGGTGGGGATGCACATCTGTCGTGGGACTAGGTTCTAGTACGCTGTTATTCCTAAGAACCAAATATGCGTATGAACATTTTGAGAACCACCGTATTTCAACGCAAGTTATTGTGCCTTAA 1845 0.4287 MRPRNNNNNNRFNFNLNSNNLEESPKSRRRITFLNNRVSLLMAGQSRKWMILVVTIWIQAFTGTNFDFSQYSSSLKSALEISQVQLNYLATANDMGKIFGWSSGLALMHLPVSVVMFIAAFMGFLGYGVQWLLINHFISLPYFLVFLLSLLSGCSICWFNTVCFILCIRNFPVNRTLALSLTVSFNGVSAALYTLAANSIDPSPDSLYLLLNALVPLFVCIAATIPILRQPPLDPLPPDAVNRDSLVFLILNFLAIFTGLYLLLFGSSASSMASARLHFGGTVLLLILPLFIPGIVYARAWAQRTIHSSFQVEGSSIILIHDDDLELHKELLSRHNSSIVGNGDGYSLLSDNGSMFSSQKESDSDVCCDRMIGQDHLTMLGEEHSAAVIVRRLDFWLYYITYFCGGTIGLVYSNNLGQIAQSLGLKSSTSSLVTLYASFSFFGRLLSAGPDYVRSKFYFARTGWLSIALIPTPIAFFLLAASDSSLALHTGTALIGLSSGFIFAAAVSVTSELFGPNSVGVNHNILITNIPIGSLLYGFLAALVYDAHAHSTPGNLTTSDSVVCMGRQCYFWTFIWWGCTSVVGLGSSTLLFLRTKYAYEHFENHRISTQVIVP* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2259 614 PANTHER NODULIN-LIKE/MFS TRANSPORTER 30 614 - -
Mtr8g2259 614 SUPERFAMILY MFS general substrate transporter 21 231 IPR036259 -
Mtr8g2259 614 Pfam Nodulin-like 48 293 IPR010658 -
Mtr8g2259 614 Gene3D MFS general substrate transporter like domains 390 603 IPR036259 -
Mtr8g2259 614 MobiDBLite consensus disorder prediction 1 22 - -
Mtr8g2259 614 SUPERFAMILY MFS general substrate transporter 384 596 IPR036259 -
Mtr8g2259 614 MobiDBLite consensus disorder prediction 1 23 - -
Mtr8g2259 614 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 30 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2259 Mtr-Chr8 32808947 32816449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2259 1 608 Nodulin-like Gene Family AT1G31470 56.209 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2259 - - cam:101496594 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2259 8 32808947 32816449 Mtr8g2259 8 32808947 32816449 ECH
Mtr5g1086 5 10857955 10862534 Mtr8g2259 8 32808947 32816449 PCT