Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2255 ATGTTCCTGTTGAAATGTGTCTCAAAATTGATGTTGAAGTCTGGAAAAATCGTCGCACGTTTGCAGGAGGAACGTGGCACGATGCAGGAGGAACGCGACACGATCCAGGAGAAACATGACACGATGCAGACGGATAAGGAAGACGTTGATGCTTTCAAACAGGAAGACGAGGGGGTGAACATGACGGGGAAGACATTTCAGAAAAATGGTGTTAAAAGAAGGGCTGGCGATTCTAGTCCCGAGGAACGTGCAAATGCCACACAAGTTCAGGGTACATACTTGCCCATTGTGAGGGAGAAGCCATCTGTCGAACTTGTTAAGGTTACCGATGAAATGAAGGCATTCAAAGCTTACTATAAGCTTCGTCTTGAATGCCAGATTAAAGAGAGCCGCTGA 396 0.4646 MFLLKCVSKLMLKSGKIVARLQEERGTMQEERDTIQEKHDTMQTDKEDVDAFKQEDEGVNMTGKTFQKNGVKRRAGDSSPEERANATQVQGTYLPIVREKPSVELVKVTDEMKAFKAYYKLRLECQIKESR* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2255 131 MobiDBLite consensus disorder prediction 23 57 - -
Mtr8g2255 131 Coils Coil 18 38 - -
Mtr8g2255 131 MobiDBLite consensus disorder prediction 23 87 - -
Mtr8g2255 131 PANTHER 60S RIBOSOMAL PROTEIN L13 64 128 IPR001380 GO:0003735|GO:0005840|GO:0006412
Mtr8g2255 131 PANTHER 60S RIBOSOMAL PROTEIN L13 64 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2255 Mtr-Chr8 32750154 32752270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2255 66 124 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 69.492 9.56e-23 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2255 K02873 - gmx:100805957 95.1301