Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2248 ATGGAAAGGTACAAATTAATTAAGGAAATTGGTGATGGAACATTTGGGATTGTCTGGAGAGCCATTAATAAGCAAAGCGGCGAAGTTGTTGCTATCAAGAAAATGAAAAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCATTACGAAAAATGAATCACTCGAATGTCGTGAAGCTGAAGGAAGTTATTCGAGAAAGTGACATTCTGTACCTTGTTTTTGAGTACATGGAATGCAACCTCTACCAACTTATGAAAAAAAGGGAAAAGCTGTTTTCTGATGATGAAGTTAGAAATTTGTGCTTTCAAGTTTTCCAAGGTCTTGCATACATGCACCAGCGTGGATACTTCCATCGTGATCTAAAGCCTGAAAACTTGTTAGTCACCAAGGATATTATTAAAGTTTCTGATTTCGGCCTAGTGCGAGAGATCAGCTCACAACCACCCTATACTGAGTATGTCTCAACACGGTGGTATCGTGCTCCTGAAGTCCTGCTTCAGTCTTCCCTTTATAGTTCCAAAGTTGACATGTGGGCTATGGGTGCTATTATGGCTGAATTGTTCACTCTCCGTCCTCTATTTCCGGGTACCAGTGAAGCAGATGAGATCTACAAAATTTGCGGTGTGATAGGTAGTCCAACTGCTGAATCTTGGGCTGATGGACTCAAACTTTCTAGGGATATCAACTATCAGTTTCCACAGGTAGCTACTGCAGATCTCTCTGTACTTATACCATCCAGAAGCGATGATGCAATCAACCTTATCAAATCACTTTGTTCATGGGATCCCTGCAAGAGACCTTCTGCAGCAGAGGCCCTTCAACATCCTTTCTTCAAGAGTTGCTTTTACATTCCTCCATCGCTTCGCACCAAAGGAGTAACAAGAACTCCTCCATCTGCAGGAATAAGGGGATCGGTAGATCGGCAAGGGGTCAAGAGATATTCTGGTGGATTGCTCAATTCGAAATTGACCACTAATTTTTCTTCCAACAAATTACATCCTGCTTTAGCTCCAGGTGTGCAAAGGAAACTGGATATGGCAAACGAGGATGGAACTAAAAATAAGAAAACAGTGAAGACTACTCAACCATCAAAATATCGACCGCCAGGAAAAGACAGTCCGACTTCTATAAACAAGGGCAGAACTGCTCGTGGTGTTTCAGAAACAGCCAACAAGTTGGCCAACATGTCAATTGCTACTCGAAGACAGTCATTGGGTCAAACCCGTCCACCTCCAATGAAGGCCGGAGTTAACTGGACTTCTGAATCTGGAAACATTCTGCTCAGGTCCTCCCACCCGATTCCAACTGGAAGAACTTTCACAAAAAAAGTTGCTGGATGA 1356 0.4263 MERYKLIKEIGDGTFGIVWRAINKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHSNVVKLKEVIRESDILYLVFEYMECNLYQLMKKREKLFSDDEVRNLCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDIIKVSDFGLVREISSQPPYTEYVSTRWYRAPEVLLQSSLYSSKVDMWAMGAIMAELFTLRPLFPGTSEADEIYKICGVIGSPTAESWADGLKLSRDINYQFPQVATADLSVLIPSRSDDAINLIKSLCSWDPCKRPSAAEALQHPFFKSCFYIPPSLRTKGVTRTPPSAGIRGSVDRQGVKRYSGGLLNSKLTTNFSSNKLHPALAPGVQRKLDMANEDGTKNKKTVKTTQPSKYRPPGKDSPTSINKGRTARGVSETANKLANMSIATRRQSLGQTRPPPMKAGVNWTSESGNILLRSSHPIPTGRTFTKKVAG* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2248 451 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 404 - -
Mtr8g2248 451 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Mtr8g2248 451 Gene3D Transferase(Phosphotransferase) domain 1 84 288 - -
Mtr8g2248 451 MobiDBLite consensus disorder prediction 352 394 - -
Mtr8g2248 451 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2248 451 CDD STKc_MAK_like 4 283 - -
Mtr8g2248 451 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2248 451 MobiDBLite consensus disorder prediction 362 394 - -
Mtr8g2248 451 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Mtr8g2248 451 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Mtr8g2248 451 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 1 404 - -
Mtr8g2248 451 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2248 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2248 Mtr-Chr8 32684258 32691217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2248 1 290 Core Cell Cycle Gene Families AT3G48750 37.919 2.08e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Mtr8g2248 Pkinase 6.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2248 K08829 - gmx:100784474 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2248 8 32684258 32691217 Mtr8g2248 8 32684258 32691217 ECH