Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2247 ATGTTTACATGCATAGCTTGTACGAAAACAGATGAGAGGGATGAAGATGGGCGTGAGAGTGGCACGCCTAGTACTAAAGAAGCCGTCAAAAGCCTCACCACTCAGATAAAGGACATGGCACTGAAGTTTTCAGGTGCTTACAAGCAATGCAAACCTTGCACAGGAGGATCAAGTAGCTACAACAAGAAAGGACATAGACCATATCCAGACTTTGACACAATCTCAGAAGGGGTACCATACCCTTATATTGGAGGTGCAAGCTCAAGTTCAACCCCTGCATGGGACTTCACTAGCTCTAACTACCCTGGTCCAAGATATGCCGGAGACCGCACCCCTAGAGGACGCGACTCTGCATCAGTATGTGATGTTGTGTTAGAGGATGATGATGAACCAAAGGAATGGATGGCACAGGTTGAACCGGGGGTTCATATTACCTTTGTGTCTCTTCCTAATGGTGGAAATGATCTCAAGAGAATTCGCTTCAGCCGTGAGATGTTCAATAAATGGCAAGCTCAAAAATGGTGGGGCGAGAATTATGACAGAATCATGGAACTTTACAATGTCCAAAGATTCAATCGACAAGCTCTCAACACTCCTTCAAGGTCTGAAGCCGATGAGCAAAGAGATTCTACTTACTCAAGATTGACATCAGCAATGGAAAGTCCTATGGCATCAGTTAAGGATTGGACACCAAGGAGTCACTACAAACCCTCTGGAGCGTTTGATCAAGGCGGTGGCAACCACTTTCAAGGAGGTTCATCTATGGAACCATCAAGGGCAACCACCTCATCTAGGGATGAACCTTCAATTAGCAATGCAAGTGAAATGGAGTCAGAATGGGTAGAACAAGATGAGCCTGGAGTTTACATTACAATCAGACAGTTAGCTGACGGTACTAGGGAGCTTAGACGTGTCAGATTCAGCCGGGAAAGATTTGGAGAGGTAAATGCGAAAACATGGTGGGAAGATAACAGAGAAAGAATTCAAGCTCAATACCTTTGA 1002 0.4511 MFTCIACTKTDERDEDGRESGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGGSSSYNKKGHRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTSSNYPGPRYAGDRTPRGRDSASVCDVVLEDDDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQKWWGENYDRIMELYNVQRFNRQALNTPSRSEADEQRDSTYSRLTSAMESPMASVKDWTPRSHYKPSGAFDQGGGNHFQGGSSMEPSRATTSSRDEPSISNASEMESEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEDNRERIQAQYL* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2247 333 MobiDBLite consensus disorder prediction 197 282 - -
Mtr8g2247 333 ProSiteProfiles BRX domain profile. 278 333 IPR013591 -
Mtr8g2247 333 ProSiteProfiles BRX domain profile. 132 187 IPR013591 -
Mtr8g2247 333 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 333 - -
Mtr8g2247 333 MobiDBLite consensus disorder prediction 9 28 - -
Mtr8g2247 333 MobiDBLite consensus disorder prediction 9 23 - -
Mtr8g2247 333 Pfam Transcription factor BRX N-terminal domain 20 53 IPR027988 -
Mtr8g2247 333 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 333 IPR044532 -
Mtr8g2247 333 MobiDBLite consensus disorder prediction 247 277 - -
Mtr8g2247 333 Pfam Transcription factor regulating root and shoot growth via Pin3 132 186 IPR013591 -
Mtr8g2247 333 Pfam Transcription factor regulating root and shoot growth via Pin3 277 332 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2247 Mtr-Chr8 32674741 32682835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2247 1 333 Major Intrinsic Protein MIP AT1G31880 68.661 1.36e-165 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2247 - - gmx:100785003 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2247 8 32674741 32682835 Mtr8g2247 8 32674741 32682835 ECH