Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2237 ATGCATCCTTTCTCATTAACCCTTGAAACCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTATTTCTCAACCTTCTTCTCATGTTCCTATTCCTACTATCACCCCCGATCTTAGTATTTCTCATCAAATCCCTAAAATTTCAACCTTAAATCACACCACTCTCACCCCACCCCCAATCACCACCATATCCACCAGAACATCACTTCAAACGTCACTCGTTCCAAACCTGGAACCTTTTAACAATTTCTTCGCATCCCAAGATTCCCAACAACAACCTAATTTCTCTCCTGAATCAGAAACCGATGATCAACTCGACCTATACACCAAATTCTACCACACCTCAAAATTCTACCCTTTTCTCGAAATCGTCGATTCCAACAATGATTTTGTTGTTTCATTGGAGAATACGGTAAATGTTTGTAACCAGAACCTAAATCTCAACCTTAATTTGGGGGTGGATTCGGTAAATGATGGAAATGATCGAGCTATTTTTGTGGTTCCTGAGCAACAAGAGTCGAGTTTGATGGTGGATATGGTTAGGGAGAAGGAGAGCCAGGTGATGGAACTTGTGAGGTTTTTAGATCTAAGTACGAAGGATCAAATGCACTTTCATCATGAGATAAGGAGGAAGCGAATGATTTATGATTCCCTTCGCGTGTTGGTGAGTATTGAGGAGGAGAAGAGAATGAACGAGGAGAAGAAATTGGATGCAGAAGTTGCAGTTGTGGAGGCAGAGATGAGAGTGGGTGAGGAGAATAGGGTGGTGGCTACCAGGGTGGAGGGGGAGACAATTAATGGAATAAGGCGTCGTAGTCGCAACCAAATTCATGGCTATATGACGGCTGCAACATTAATGAAGGAGTGTGGGTTATGGTTGTATCATGATCAAAGGATAGTTGGACCGATACCTGGAATTTATGTTGGTGATGTGTTTATGTTTAGGATGGAATTGTGTGTAACTGGTTTACATATGCATCCTCAAGCTGGTATTGATTATTTATCAAATAGTATCTCTTATAATGGTGAACCAATTGCTACTAGTGTGATTGTTTCAGGTGGTTATGAGGATGACATGGAATTAGATGATGGTGATGTTATAATCTACACTGGCCATGGAGGGCGAGAGAAGAATTCCTCAAGGCAAATTTGTGATCAGAAATTGGAGGGTGGAAACCTTGCATTGGAAAGGAGTATGCATTATGGGATTGAGGTTAGGGTTATTCGTGGGATGAAGTATGAAGGGAGCGCATCTACTTCTGGTAAGGTTTATGTTTATGATGGATTGTATAAGATTGTTAGTTGCCGGTTTGATCTAGGAAAGTCTGGTTTTGGAGTTTATAAGTATAAGTTATTGAGAATTGAGGGGCAAGTGAAGATGGGTAGCACTATTCTCAAAGATGCTAGGGATATTAAGAAAATTGAGTTGGATTTCATGCCTATGAGTTGTCTCTCTATTGATATTTCAAATAATAGGGAAAATGTTCCAATTAGGCTATTTAATGATATAGATGTCAATCAAGAACCTCTTTATTATATGTATCTTCCGAATACTACTTTCCCGTGGTTTGTATTTCATCAGAGTGGGGAAGCTAATGGTTGTGGATGTAAGGAGGCTTGCACTGACGGTTGCTTTTGCGCTATGAAGAATGGAGGAGAGTTTCCCTATAATCTACATGGATTGCTTGTGAAAGGGAAACCTTTGATTTTTGAATGCGGCCCTTTTTGCTCATGTCCTCCTAATTGTCGAAACCGTGTTGCACAAAAGGGGCTCAAATATAGCTTGGAAGTGTTTAGGTCTACACAGACAGGTTGGGGAGTTAGATCCTTGGACCTTATTCAGGCTGGATCATTTATCTGCGAGTATACTGGTGTTGCTATGACTAGTGAACAAGCTCAAACTTTAACAATGAATGAGGACTCGTTGGTATATCCTAGTAGATTTGCAAATAGATGGGTAGAATGGGGTGATTTATCTCAGATATACACTAAATATGTGCGACCATCTTATCCACCAATACCTCCTTTAGATTATTTTCTTGATGTGTCAACAATGAGAAATGTTGCATCCTATATGAGCCATAGTTCGAGTCCAAATATATTCATTCAGTATGTTCTCTATGATCACAACAATTTGTTGTTCCCTCATGTCATGTTATATGCAATGGAGAACATCCCTCCTATGAGAGAACTCTGCATAGATTATGGCATCTCAGACGAGTGGGCGAACAAGATGTCTATATGTATGTAA 2250 0.3996 MHPFSLTLETPSSSSSSSSSSISQPSSHVPIPTITPDLSISHQIPKISTLNHTTLTPPPITTISTRTSLQTSLVPNLEPFNNFFASQDSQQQPNFSPESETDDQLDLYTKFYHTSKFYPFLEIVDSNNDFVVSLENTVNVCNQNLNLNLNLGVDSVNDGNDRAIFVVPEQQESSLMVDMVREKESQVMELVRFLDLSTKDQMHFHHEIRRKRMIYDSLRVLVSIEEEKRMNEEKKLDAEVAVVEAEMRVGEENRVVATRVEGETINGIRRRSRNQIHGYMTAATLMKECGLWLYHDQRIVGPIPGIYVGDVFMFRMELCVTGLHMHPQAGIDYLSNSISYNGEPIATSVIVSGGYEDDMELDDGDVIIYTGHGGREKNSSRQICDQKLEGGNLALERSMHYGIEVRVIRGMKYEGSASTSGKVYVYDGLYKIVSCRFDLGKSGFGVYKYKLLRIEGQVKMGSTILKDARDIKKIELDFMPMSCLSIDISNNRENVPIRLFNDIDVNQEPLYYMYLPNTTFPWFVFHQSGEANGCGCKEACTDGCFCAMKNGGEFPYNLHGLLVKGKPLIFECGPFCSCPPNCRNRVAQKGLKYSLEVFRSTQTGWGVRSLDLIQAGSFICEYTGVAMTSEQAQTLTMNEDSLVYPSRFANRWVEWGDLSQIYTKYVRPSYPPIPPLDYFLDVSTMRNVASYMSHSSSPNIFIQYVLYDHNNLLFPHVMLYAMENIPPMRELCIDYGISDEWANKMSICM* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2237 749 MobiDBLite consensus disorder prediction 1 35 - -
Mtr8g2237 749 SUPERFAMILY PUA domain-like 282 465 IPR015947 -
Mtr8g2237 749 Pfam SET domain 604 736 IPR001214 GO:0005515
Mtr8g2237 749 Gene3D - 298 461 IPR036987 -
Mtr8g2237 749 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 65 746 - -
Mtr8g2237 749 SMART preset_2 485 577 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr8g2237 749 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 121 748 IPR025794 GO:0016571
Mtr8g2237 749 Pfam SAD/SRA domain 300 457 IPR003105 -
Mtr8g2237 749 Pfam Pre-SET motif 488 585 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr8g2237 749 Gene3D SET domain 462 749 IPR046341 -
Mtr8g2237 749 ProSiteProfiles YDG domain profile. 301 453 IPR003105 -
Mtr8g2237 749 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 65 746 - -
Mtr8g2237 749 SMART G9a_1 296 457 IPR003105 -
Mtr8g2237 749 ProSiteProfiles Pre-SET domain profile. 532 590 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr8g2237 749 SUPERFAMILY SET domain 476 739 IPR046341 -
Mtr8g2237 749 ProSiteProfiles SET domain profile. 593 736 IPR001214 GO:0005515
Mtr8g2237 749 SMART set_7 593 742 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2237 Mtr-Chr8 32584377 32586695 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2237 301 738 Su(var)3-9 homologs AT5G04940 39.651 8.93e-98 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr8g2237 SAD_SRA 1.4e-47 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2237 K11420 - gmx:100785015 795.038