Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2231 ATGAAAATACAAAGTGTGTTTCTCTTTTTGTTATTCTTATGGGCTCAAATTCATCTCATCTTTTCAATTACTGATCCTCAAGATGTTACCGTACTTATGTCTCTAAAAGATGCATGGCAAGATACACCACCCAGCTGGGACAAATCAGATGACCCTTGTGGAGCACCTTGGGAAGGAGTAATCTGCAATAAATCAAGGGTTACTTCATTGAGATTGTCAACCATGGGCCTGAAGGGTGAATTAAGTGGAGATATTGGTGGACTCACAGAATTAAGATCCTTGGACTTGTCCTTTAATAAAGGTTTAATGGGTCCTATCTCTCCACAATTGGGAGACTTAAGCAAGCTAAATATTCTGATTTTGGCTGGTTGCAGCTTCAGTGGCAATATTCCAGATAGATTGGGGGATCTTTCAGAGCTATCTTTCTTGGCTTTAAATTCAAACAACTTCACTGGAAAAATACCTCCTTCATTGGGGAAACTCTCCAAACTTTATTGGTTGGACTTGGCAGACAATCAGCTTACAGGACCACTCCCAGTTTCAACCTCCATTACCCCTGGCTTAGACCTCCTTTTAAAGGCTAAGCACTTCCATTTCAATAAAAACAAGCTTTCTGGTACCATTCCTCCGAAACTTTTCAGCTCTCACATGGTACTCATACACATATTATTTGATGGAAATGATTTAAGTGGAAGTATACCTTCTACAATAGGACTAGTTCAAACAGTTGAGGTTCTTCGGTTCGACAGAAATTTCTTGACAGGAGAGGTCCCTTCAAATCTCAGTAACCTTAGCAACATCACCGAATTGAATTTAGCACACAACAGTTTGTCAGGTCCTTTGCCAGACTTAACATCAATGGATAACCTCAATTATGTGGATCTTAGTAACAATTCCTTTGATCCATCAAAAGCTCCAATTTGGTTTTCAACTTTATCATCACTCACCACTCTTGTTATGGAGTTTGGAGCACTTGAAGGTCCTCTTCCATCAAAACTATTCAGCAGTCCTCAAATACAGCAAGTGAAACTAAGAAGCAATGCACTGAACAAAACACTAAACATGGATGACAGCATTTATCCCCGGTTGAAGCTTGTGGATTTACAAGAGAATAGGATTTCAACAGTCATAATCGGGGAACATTACAAAAATACATTGATTCTCATTGGAAATCCAGTGTGCAGTACTGGTCTCTCAAATGCAAATTACTGCAACCTTCGGCAACAGCTTAAACAGCCCTATTCCATTAGCTTGGCTAATTGTGGAGGAATATTATCATGTCCCCTGGATCAAAAGCTCAGTCCACAAAGTTGTGCATGTGCCTATCCATATCAAGGAATGTTGTACGTTAGAGGACCTTTGTTTAGAGAATTGTCTAATATAACTATTTTCCATTCACTTGAAAAGAGCTTATGGGAGAAATTGGGTTTAACACCTGGTTCAGTTTCTTTACAAAACCCTTTTTTCAATGGTGATGATTATCTTCAAATGCAACTAGCACTCTTTCCACCAACAGGACAATATTTTAATAGGTCAGAAGTTCAAAGATTTGGATTTTCATTGAGTAATCAAACATACAAGCCTCCACATGAATTTGGACCCTACTACTTCATTGCATCTCCTTATGCTTTTCCAGATTCCTACAAAGGAGCTTCTCTTAGCATAGGTACTATTATTGGGATAACAGCTGGAAGCACAACTTTGATTTTGTGCCTCGTAGGGTTAATGGTATATGCAATCCGGCAAAAGAAGCGTGCAGAGAGAGCCATTGGAATAAGTAGACCATTTGCATCCTGGGCATCAAGTGGAAAGGATAGTGGAGGTGCACCACAATTGAAGGGAGCAAGATGGTTCTCTTATGATGAACTAAAAAAGTGCACCAACAATTTCTCAGGAAGAAATGAACTGGGCTTTGGTGGCTATGGCAAGGTGTACAGAGGGGTGTTCCCTGATAGAAAAATAGTTGCAATCAAAAGAGCTCAGGAAGGATCAATGCAAGGAGGCCTAGAGTTCAAGAATGAAATTGAGCTGCTTTCAAGAGTTCATCACAAGAATCTTGTTAGCCTTGTTGGATTCTGCTTTGAAAAAGGAGAACAGATGTTAGTTTATGAATTTATCCCCAATGGAACACTAAGGGAGAGTTTGTCAGGAAAATCTGGTATACAACTTGATTGGAAGAGGAGACTTCGTATTGCTCTTAGCTCAGCAAGAGGACTTGCATACTTACATGAACTGGCCAACCCTCCCATAATACATAGAGATGTGAAGTCAACCAATATCTTGCTGGATGACAATTTGAATGCAAAGGTTGCAGATTTTGGTCTGTCTAAGCTTGTATCAGACAGTGAGAAAGGCCATGTCTCAACTCAGGTCAAAGGGACATTGGGCTATCTAGATCCTGAATATTTCATGACTCAACAACTAACCGAAAAGAGTGACGTATACAGTTTCGGGGTAGTTATGCTTGAACTGATAACATCCAAACAGCCAATTGAAAAGGGTAAGTACGTCGTTCGCGAAGTTCGAACCTTAATGAACAACAAAGATGAAGAGTATTATGGTTTAAGGGAACTAATGGATCCAGTGGTGAGAAACACAGCCAACCTGATAGGATTTGGAAGGTTCTTAGAGTTGGCAATGCAATGCGTTGAGGGATTGGCTTCAGACCGACCAACAATGAGTGAAGTTGTGAAAGCCTTAGAAACCATATTACATAACGATGGGATGATTACAAATTCTACTTCAGCTTCTTCATCTGCCGCTAATTTTGAAGTTTCTAAAGGTGCTGCAGCAAGACATCCTTACATTGATACTCTTTTTACAAAGAAGGATGATGGTATTGAGAGTGATGCTTTTGATTACAGTGGAGGGTACACATTTTCATCTGAAGTGGAACCCAAATAG 2904 0.3984 MKIQSVFLFLLFLWAQIHLIFSITDPQDVTVLMSLKDAWQDTPPSWDKSDDPCGAPWEGVICNKSRVTSLRLSTMGLKGELSGDIGGLTELRSLDLSFNKGLMGPISPQLGDLSKLNILILAGCSFSGNIPDRLGDLSELSFLALNSNNFTGKIPPSLGKLSKLYWLDLADNQLTGPLPVSTSITPGLDLLLKAKHFHFNKNKLSGTIPPKLFSSHMVLIHILFDGNDLSGSIPSTIGLVQTVEVLRFDRNFLTGEVPSNLSNLSNITELNLAHNSLSGPLPDLTSMDNLNYVDLSNNSFDPSKAPIWFSTLSSLTTLVMEFGALEGPLPSKLFSSPQIQQVKLRSNALNKTLNMDDSIYPRLKLVDLQENRISTVIIGEHYKNTLILIGNPVCSTGLSNANYCNLRQQLKQPYSISLANCGGILSCPLDQKLSPQSCACAYPYQGMLYVRGPLFRELSNITIFHSLEKSLWEKLGLTPGSVSLQNPFFNGDDYLQMQLALFPPTGQYFNRSEVQRFGFSLSNQTYKPPHEFGPYYFIASPYAFPDSYKGASLSIGTIIGITAGSTTLILCLVGLMVYAIRQKKRAERAIGISRPFASWASSGKDSGGAPQLKGARWFSYDELKKCTNNFSGRNELGFGGYGKVYRGVFPDRKIVAIKRAQEGSMQGGLEFKNEIELLSRVHHKNLVSLVGFCFEKGEQMLVYEFIPNGTLRESLSGKSGIQLDWKRRLRIALSSARGLAYLHELANPPIIHRDVKSTNILLDDNLNAKVADFGLSKLVSDSEKGHVSTQVKGTLGYLDPEYFMTQQLTEKSDVYSFGVVMLELITSKQPIEKGKYVVREVRTLMNNKDEEYYGLRELMDPVVRNTANLIGFGRFLELAMQCVEGLASDRPTMSEVVKALETILHNDGMITNSTSASSSAANFEVSKGAAARHPYIDTLFTKKDDGIESDAFDYSGGYTFSSEVEPK* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2231 967 Pfam Protein tyrosine and serine/threonine kinase 634 900 IPR001245 GO:0004672|GO:0006468
Mtr8g2231 967 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
Mtr8g2231 967 CDD STKc_IRAK 636 903 - -
Mtr8g2231 967 Gene3D Transferase(Phosphotransferase) domain 1 706 924 - -
Mtr8g2231 967 SUPERFAMILY Protein kinase-like (PK-like) 615 913 IPR011009 -
Mtr8g2231 967 ProSiteProfiles Protein kinase domain profile. 630 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2231 967 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Mtr8g2231 967 Gene3D Ribonuclease Inhibitor 26 184 IPR032675 -
Mtr8g2231 967 Gene3D Ribonuclease Inhibitor 284 396 IPR032675 -
Mtr8g2231 967 ProSitePatterns Protein kinases ATP-binding region signature. 636 658 IPR017441 GO:0005524
Mtr8g2231 967 SMART serkin_6 630 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2231 967 PANTHER LRR RECEPTOR-LIKE KINASE 1 936 - -
Mtr8g2231 967 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 936 - -
Mtr8g2231 967 Gene3D Ribonuclease Inhibitor 185 283 IPR032675 -
Mtr8g2231 967 Gene3D Phosphorylase Kinase; domain 1 603 705 - -
Mtr8g2231 967 SUPERFAMILY L domain-like 46 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2231 Mtr-Chr8 32498784 32512863 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2231 5 967 Receptor kinase-like Gene Family AT1G79620 67.372 0.0 1363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Mtr8g2231 PK_Tyr_Ser-Thr 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2231 - - gmx:100792249 1572.37