Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2230 ATGGAAATACAAAGTGTGTTTCTCTTTTTGTTATTCTTATGGGCTCAAATTCATCTCATCTTTTCTATTACTGATCCTCAAGATGTTGCTGCCCTTAGATCTCTAAAAGATATATGGGAAAATACACCACCTAGCTGGGATAAATCAGATGACCCTTGTGGAGCACCATGGGAAGGAGTGACCTGCAACAAATCTAGGGTTACTTCATTGGGACTATCAACCATGGGCCTGAAGGGTAAATTAAGTGGAGATATTGGTGGACTCACAGAATTAAGATCCTTGGACTTGTCCTTTAACAAAGATTTAATGGGTCCTATCTCTCCAGAATTGGGAGACTTAAGCAAGCTAAATATTCTGATTTTGGCTGGTTGCAGCTTCAGTGGTAATATTCCAGATAAATTGGGGGACCTTTCAGAGCTATCTTTCTTGGCTTTAAACTCAAACAACTTCACTGGAAAAATACCTCCTTCATTGGGAAAACTCTCCAAACTTTATTGGTTGGACTTGGCAGACAATCAGCTTACTGGACCTCTCCCAGTTTCAACCTCCACAACCCCTGGCTTAGACCTCCTTTTAAAGGCTAAGCACTTCCATTTCAATAAGAATCAGCTTTCTGGTTCCATTCCTCCACAACTTTTCAGCTCTGATATGGTACTCATACACATATTATTTGATAGGAATGATTTAAGCGGAAGTATACCTTCTACAATAGGACTCGTTCAGACAGTTGAGGTTCTTCGGCTCGACAGAAATTTCTTGACAGGGGAGGTCCCTTCAAATCTCAACAAGCTTGGTAACATCAACGAATTGAATTTAGCACACAACAATTTGTCAGGTTCTTTGCCAGACTTAACTAAAATGACTTCCCTCAATTATGTGGATCTTAGCAACAATTATTTTGATCCATCAGAAGCTCCAATTTGGTTCACAACTCTACCATCACTCACCACTCTTATTATGGAGTTTGGATCTCTTGAAGGTCCTCTCCCATCAAAACTCTTCAGCAGTCCTCAAATACAGCAAGTGAAACTAAGACACAATGCATTGAACAATACACTAGACATGGGTGACAGCATTTGTCCCCAATTGCAGCTTGTGGATTTACAAGACAACCAGATTTCAACAGTAACACTCAGTTCAGAATACAAAAATACATTGATTCTCATAGGAAATCCAGTGTGCAGCACTGGTCTCTCAAATACAAATTACTGCAACCTTCAGCAACAGCCTAAACAACCCTATTCAACTAGCTTGGCAAATTGTGGAGGAATATCATGCCCCCCTGATAAAAAACTCAGTCCACAAAGCTGTGAATGTGCCTATCCATATCAAGGAATGTTCTACTTCAGAGGACCTTTGTTCAGAGAATTGTCGAATATAACTATTTTCCATTCGCTTGAAATGAGTTTATGGGTGAAGTTAGGTTTAACACCTGGCTCAGTTTCTTTACAAAACCCTTTTTTCAACGGTGACGATTATCTTCAAATGCAACTAGCACTCTTTCCACCAACAGGACAATATTTTAACAGGACAGAAGTTCAAAGAATTGGATTTTCATTGAGTAATCAAACATATAAGCCTCCACACGAATTTGGACCCTATTACTTCATTGCATTTCCTTATGCTTTTCCAGATTCCCACGGAGGATCTTCTCTTAGCAGAGGTGTTATTATTGGGATAGCAGCTGTGAGCACATTTGTGGTCCTTTGCCTCATAGGGTTAGCTGTATATGCTATCCTGCAAAAGAAGCGCGCAGAGAGAGCCATTGGAATAAGTAGACCATTTGCATCCTGGGCACCAAGTGGAAAGGACAGTGGAGGTGCACCACAATTGAAAGGAGCGAGATGGTTTTCCTATGATGAACTCAAAAAGTGCACCAACAATTTCTCTGGAAGCAATGAACTAGGTTTCGGTGGCTATGGCAAGGTGTACAAAGGGGTGTTCCCTGATGGAAAAATAGTTGCAATCAAAAGAGCTCAGCAAGGATCGATGCAAGGAGGCCTAGAGTTCAAGAATGAAATTGAATTGCTTTCAAGAGTTCACCACAAGAATCTTGTTGGCCTTGTTGGATTCTGCTTTGAACAAGGAGAACAGATGTTGGTTTATGAATTTATCTCGAATGGAACACTTAGAGAGGGTTTGTCAGGGAAATCTGGATATCAACTTGATTGGAAAAGGAGACTCCGTATTGCTCTTGGCTCAGCTAGAGGACTTGCATACTTACATGAACTGGCCAACCCTCCCATAATACATAGAGATGTGAAGTCAACCAATATCTTGCTGGACGAAAGTTTGACAGCAAAGGTTGCAGATTTTGGCCTCTCTAAGCTTGTATCAGACAGTGAGAAAGGTCATGTTTCAACTCAAGTTAAGGGGACAATGGGCTATCTAGATCCTGAATATTACATGACTCAACAACTAACCGAAAAGAGTGACGTATACAGTTTCGGGGTAGTTATGCTTGAACTGATAACATCCAAACAGCCAATCGAAAAGGGTAAGTACGTCGTTCGCGAAGTTCGAACCTTAATGAACGACAACGATGAAGAGTATTATGGTTTAAGGGAACTAATGGATCCAGTGGTGAGAAACACAGCCAACCTGATAGGATTTGGAAGGTTCTTAGAGTTGGCAATGCAATGTGTTGAGGAATTGGCTTCAGACCGACCAACAATGAGTGAAGTTGTGAAAGCGTTAGAAACCATATTACAAAATGATGGAATTAATACAAATTCCACTTCAGCTTCATCATCTGCCACTGACTTTAATGCTTCTAAGGGTGCTGCAATGAGACATCCTTATATTGATAATACTTTTACTAAGAAGGATAATGTTATTGAGAGTGATGCTTTTGATTACAGTGGAGGGTACACACTTTCAACAAAAGTGGAACCCAAATAG 2901 0.405 MEIQSVFLFLLFLWAQIHLIFSITDPQDVAALRSLKDIWENTPPSWDKSDDPCGAPWEGVTCNKSRVTSLGLSTMGLKGKLSGDIGGLTELRSLDLSFNKDLMGPISPELGDLSKLNILILAGCSFSGNIPDKLGDLSELSFLALNSNNFTGKIPPSLGKLSKLYWLDLADNQLTGPLPVSTSTTPGLDLLLKAKHFHFNKNQLSGSIPPQLFSSDMVLIHILFDRNDLSGSIPSTIGLVQTVEVLRLDRNFLTGEVPSNLNKLGNINELNLAHNNLSGSLPDLTKMTSLNYVDLSNNYFDPSEAPIWFTTLPSLTTLIMEFGSLEGPLPSKLFSSPQIQQVKLRHNALNNTLDMGDSICPQLQLVDLQDNQISTVTLSSEYKNTLILIGNPVCSTGLSNTNYCNLQQQPKQPYSTSLANCGGISCPPDKKLSPQSCECAYPYQGMFYFRGPLFRELSNITIFHSLEMSLWVKLGLTPGSVSLQNPFFNGDDYLQMQLALFPPTGQYFNRTEVQRIGFSLSNQTYKPPHEFGPYYFIAFPYAFPDSHGGSSLSRGVIIGIAAVSTFVVLCLIGLAVYAILQKKRAERAIGISRPFASWAPSGKDSGGAPQLKGARWFSYDELKKCTNNFSGSNELGFGGYGKVYKGVFPDGKIVAIKRAQQGSMQGGLEFKNEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFISNGTLREGLSGKSGYQLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDESLTAKVADFGLSKLVSDSEKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITSKQPIEKGKYVVREVRTLMNDNDEEYYGLRELMDPVVRNTANLIGFGRFLELAMQCVEELASDRPTMSEVVKALETILQNDGINTNSTSASSSATDFNASKGAAMRHPYIDNTFTKKDNVIESDAFDYSGGYTLSTKVEPK* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2230 966 SUPERFAMILY L domain-like 32 397 - -
Mtr8g2230 966 Gene3D Ribonuclease Inhibitor 285 404 IPR032675 -
Mtr8g2230 966 Gene3D Transferase(Phosphotransferase) domain 1 705 925 - -
Mtr8g2230 966 ProSiteProfiles Protein kinase domain profile. 629 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2230 966 SUPERFAMILY Protein kinase-like (PK-like) 614 912 IPR011009 -
Mtr8g2230 966 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 935 - -
Mtr8g2230 966 Gene3D Phosphorylase Kinase; domain 1 603 704 - -
Mtr8g2230 966 ProSiteProfiles Leucine-rich repeat profile. 266 288 IPR001611 GO:0005515
Mtr8g2230 966 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Mtr8g2230 966 CDD STKc_IRAK 635 902 - -
Mtr8g2230 966 ProSitePatterns Protein kinases ATP-binding region signature. 635 657 IPR017441 GO:0005524
Mtr8g2230 966 Gene3D Ribonuclease Inhibitor 185 284 IPR032675 -
Mtr8g2230 966 SMART serkin_6 629 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2230 966 Pfam Protein tyrosine and serine/threonine kinase 633 899 IPR001245 GO:0004672|GO:0006468
Mtr8g2230 966 ProSitePatterns Serine/Threonine protein kinases active-site signature. 749 761 IPR008271 GO:0004672|GO:0006468
Mtr8g2230 966 Gene3D Ribonuclease Inhibitor 28 184 IPR032675 -
Mtr8g2230 966 PANTHER LRR RECEPTOR-LIKE KINASE 1 935 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2230 Mtr-Chr8 32488570 32496755 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2230 5 966 Receptor kinase-like Gene Family AT1G79620 69.749 0.0 1414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Mtr8g2230 PK_Tyr_Ser-Thr 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2230 - - gmx:100792249 1658.27