Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2226 ATGAGCAGCAACGACGTCGATAAAACGATAAAAGAAAAGGAGCCTAAGACGCCTCCAGCTGCTACGTCACAGGAGCAGTCTTCAACGACAACTGGCACTCCGGCAGTTAATCCCGAATGGGCTAACTATCAGGCATATCCTTCTATACCTCCACCTGGATTCATGGCATCAAGTCCCCAAGCTCACCCATATATGTGGGGTGTCCAGCATATGATGCCTCCCTATGGCACCCCACCACATCCTTATGTCGCAATGTATCCCCATGGTGGCATATATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGTCCTTATGCCATGCCTTCTCCAAATGGTATGGTGGATGCTTCAGGGAATACTCCAGGCAGCAGTGAAGCTGATGGTAAACCTCATGAGGTGAAGGAAAAATTACCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTCAAATATGGTTACAAGAAAAAATAATGAGCTTGGTAAAACACCAGGGGCATCTGCTAATGGAATTCATTCCAAAAGTGGGGAGAGTGCAAGTGAAGGCACTAGTGAAGGAAGCGATGAAAACTCCCAGAATGGCTCTCAATTGAAATTCGGGGAGAGGCAGGATTCTTTTGAAGATGACCCATCTCAAAATGGCAGTTCAGTGCCTCAAAATGGCGCACTTAATACACCTCATACAGTTGTTAACCAAACTATGTCTGTCGTACCTATGTCTGTTGCTGGTCCTCTCACAACAGTTCCTGGTCCCACAACTAACTTAAATATAGGAATGGATTATTGGGGAACACCAACTTCATCCACCATTCCTGCAATGCACGGAAAGGTACCTTCTACTGCAGTTGCTGGAGGAATGGTTAATGCTGGGCCACGAGATGGTGTTCATTCACAACTTTGGCTACAGGATGAAAGGGAGCTTAAACGACAAAGGCGGAAGCAGTCTAATAGGGAATCTGCACGTAGATCCAGGTTGCGAAAGCAGGCCGAATGTGATGAACTAGCTCAGCGTGCTGAGGTTTTGAATCAAGAAAATGCCTCTCTCCGTGCTGAACTGAGCCGGATCAAGAGTGAATACGAGAAGATACGTTCTGAGAATGCTTCCCTCAAGGAGAGACTCGGGGAGATACCAAGGAACGAGGATCTTGGGGAGGGCCAGAATGATCAGCATGTGGGTGAAGGCACTCAATAG 1194 0.469 MSSNDVDKTIKEKEPKTPPAATSQEQSSTTTGTPAVNPEWANYQAYPSIPPPGFMASSPQAHPYMWGVQHMMPPYGTPPHPYVAMYPHGGIYAHPSMPPGSYPFSPYAMPSPNGMVDASGNTPGSSEADGKPHEVKEKLPIKRSKGSLGSSNMVTRKNNELGKTPGASANGIHSKSGESASEGTSEGSDENSQNGSQLKFGERQDSFEDDPSQNGSSVPQNGALNTPHTVVNQTMSVVPMSVAGPLTTVPGPTTNLNIGMDYWGTPTSSTIPAMHGKVPSTAVAGGMVNAGPRDGVHSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLNQENASLRAELSRIKSEYEKIRSENASLKERLGEIPRNEDLGEGQNDQHVGEGTQ* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2226 397 MobiDBLite consensus disorder prediction 129 143 - -
Mtr8g2226 397 Gene3D - 308 362 - -
Mtr8g2226 397 Pfam Disordered region downstream of MFMR 137 272 - -
Mtr8g2226 397 SUPERFAMILY Leucine zipper domain 308 364 IPR046347 GO:0003700|GO:0006355
Mtr8g2226 397 MobiDBLite consensus disorder prediction 145 201 - -
Mtr8g2226 397 MobiDBLite consensus disorder prediction 1 15 - -
Mtr8g2226 397 MobiDBLite consensus disorder prediction 306 330 - -
Mtr8g2226 397 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 312 327 IPR004827 GO:0003700|GO:0006355
Mtr8g2226 397 MobiDBLite consensus disorder prediction 1 38 - -
Mtr8g2226 397 MobiDBLite consensus disorder prediction 210 226 - -
Mtr8g2226 397 MobiDBLite consensus disorder prediction 360 397 - -
Mtr8g2226 397 Pfam bZIP transcription factor 305 367 IPR004827 GO:0003700|GO:0006355
Mtr8g2226 397 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 397 - -
Mtr8g2226 397 MobiDBLite consensus disorder prediction 19 38 - -
Mtr8g2226 397 MobiDBLite consensus disorder prediction 114 226 - -
Mtr8g2226 397 MobiDBLite consensus disorder prediction 360 388 - -
Mtr8g2226 397 CDD bZIP_plant_GBF1 310 360 IPR045314 GO:0003700|GO:0006355
Mtr8g2226 397 SMART brlzneu 305 369 IPR004827 GO:0003700|GO:0006355
Mtr8g2226 397 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Mtr8g2226 397 Coils Coil 325 373 - -
Mtr8g2226 397 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 397 IPR044827 GO:0003700|GO:0006355|GO:0043565
Mtr8g2226 397 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 307 370 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2226 Mtr-Chr8 32460047 32466896 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2226 1 383 bZIP Transcription Factor Family AT2G35530 65.217 1.59e-166 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr8g2226 MFMR_assoc 3.7e-53 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2226 K09060 - gmx:778122 603.594