Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2221 ATGGAGAAAAAGGAATCATCAGCTAATTCTGGAACCAGTAAAGAATCTGTGAACAAATGGATGGCATTTGCTAACAAACCAGATGAAAACTCAACATCAACAAAGGCTCCTTCTGGTGATAATGATCAAATTCTAACCGAAGCAAGTATAGCCGAGAGAGCTGCGGAATGGGGACTAGTGGTAAACTCAGGCAATTTGGTAGCAGCAGTTGAGACAAGTTCTTCTTCATTGGATGGTGATAAGAGCAAAGGCATGTCAGATAGGTTTGCTGATTCGACAAGGACTTCAGGGGAATCGAATTATGGTTCGGAGGCTAAATTGTCGGGGCTGTTTCCAAGAGTTTCGCAAGAATTGAAGGACGCGTTGTCTACACTTCAACAAACATTTGTTGTCTCAGATGCAACTAAACCTGATTGTCCTATCTTGTATGCAAGCAGTGGTTTTTTTAGTATGACTGGTTACTCTTCTAAGGAGGTTATTGGAAGGAATTGCCGATTTCTTCAAGGACCTGAAACTGACCAGAACGAAGTAGCAAAAATTCGGGATGCAACGAAGAATGGGAAAAGTTATTGTGGCAGGCTTTTAAACTACAAGAAAAATGGAACTCCGTTTTGGAATCTTCTCACTGTCACTCCAATTAAGGATGATCGTGGCAATACTATCAAATTCATTGGAATGCAGGTTGAGGTGAGCAAATACACAGAAGGTGTGAATGAGAAGGCACTAAGACCAAATGGATTACCAAAATCATTAATTCGCTATGACGCTCGTCAAAAGGAGGAAGCTATGGGTTCAATCACAGAGGTTGTTCAAACCGTTAGGAATCCAAAATCGATTATTCGCAGTAAGAACGATGACACTGCAACCATCATGCATGAAGAGCCGGAGAATCTCAATCATGATTTTGTTTTGCCAAAGTCTGTTGAACCTGTGAACGACACTACAACACCTGGTAGACAAACTCCACTGAAATTCCATGGCGATAATAATAATATGTCGCGCTTTAGTTCTTACGAGGAAAGGAACAACAAATCATCAAGAAAATCTGGAATTACTTCTTTGAAAGGTGTTAAAGGGAAATCTATGAGTTCTGTAGGGAGAGATAAGGACAAGACTATTGTTGAACCTGAAGTTTTGATGACAAAGGAAATAGAGTGGTCCAAATATGAGCTAAGAGAGAGGGATATAAGACAAGGAATTGATCTAGCAACCACATTGGAGAGGATAGAAAAGAATTTTGTGATTTCTGATCCTAGACTTCCAGATTGTCCAATTATATTTGCATCAGACAGCTTTCTCGAGCTTACAGAATATACACGAGAAGAAATTTTGGGTCGAAACTGTCGGTTTCTTCAAGGACCAGAAACAGACCAAGCAACTGTCAATAGGATTAGAGATGCTATCAAAGATCAGAGGGAAATCACAGTTCAGCTGATCAACTATACAAAAAGTGGAAAGAAATTCTGGAATTTGTTTCACTTGCAACCTATGCGTGACCAAAAGGGTGAACTTCAATACTTCATTGGTGTACAATTAGATGGAAGTGATCATTTAGAACCTTTAAGAAACCGCCTGTCCGAGGGTTCTGAGATACAAAGTGCTAAATTGGTGAAAGCCACTGCAGAAAATGTTGATGGAGCTGTTAGAGAACTTCCTGATGCCAATTTGAGACCAGAAGATTTGTGGGCAATTCATTCTCAAGCAGTTTCCCCAAGACCACACAAAAGGGACAATCCTTCTTGGGTAGCTATTCAAAAGATAACTGCAAGAGGAGAGAAAATTGGGCTTCATCATTTTTCTCCCATAAGGCCCTTGGGTTGTGGAGATACTGGCAGTGTTCATTTAGTGGAACTCCAAGGTACTGGCGAACTATATGCAATGAAGGCAATGGAAAAGTCTGTAATGCTAAATCGTAATAAGGTTCATCGAGCGTGCATTGAAAGAGAGATTATATCATTACTGGATCATCCTTTTCTTCCAACACTATACACCTCATTTCAAACAGACACACATGTATGTTTGATTACTGACTTCTGCCCTGGGGGCGAGTTGTTTGCATTACTCGACAGGCAACCCATGAAGATTTTAAAAGAAGATTCAGCAAGGTTCTATGCAGCAGAGGTTGTTATTGGTTTGGAATATCTCCATTGTTTGGGTATAATTTATCGTGACTTAAAGCCTGAAAATCTCTTACTTCAGAAGGATGGCCATATTGTATTAACTGATTTTGATCTATCGTTTATAACATCCTGTAAACCCCAGGTTGTGAAGCAGTCATTACCTGGTAATAGAAGAAGATCTCGAAGTCAGCCACCACCTATATTTGTTTCCGAGCCAGTAACACAATCAAACTCATTTGTTGGAACTGAAGAATACATTGCCCCGGAAATCATAACCGGAGCGAGGCATACAAGTGCTATAGATTGGTGGACCCTTGGAATCTTGTTGTATGAGATGCTATATGGTCGCACACCATTTAGAGGAAAGAATAGACAGAAGACATTTTCCAACATCTTACACAAGGATCTTACCTTTCCAAGCAGCATCCCGGCTAGTCTTGCAGCCAGGCAGTTGATTAATGCACTATTGCAAAGAGACCCTGCCAGTCGTCTAGGTTCAGCAACAGGAAGCAATGAAATCAAACAACATCCTTTTTTCCGTGGAATCAATTGGCCTTTAATCCGCAACATGAGTCCACCCCCATTAGATGTTCCTCTTCAATTCATAGGAAAAGATCCAACGGCCAAGGACAAGAAGTGGGAAGATGATGGTGTTCTCAATACCTCCATTGATATGGATATTTTTTGA 2808 0.4056 MEKKESSANSGTSKESVNKWMAFANKPDENSTSTKAPSGDNDQILTEASIAERAAEWGLVVNSGNLVAAVETSSSSLDGDKSKGMSDRFADSTRTSGESNYGSEAKLSGLFPRVSQELKDALSTLQQTFVVSDATKPDCPILYASSGFFSMTGYSSKEVIGRNCRFLQGPETDQNEVAKIRDATKNGKSYCGRLLNYKKNGTPFWNLLTVTPIKDDRGNTIKFIGMQVEVSKYTEGVNEKALRPNGLPKSLIRYDARQKEEAMGSITEVVQTVRNPKSIIRSKNDDTATIMHEEPENLNHDFVLPKSVEPVNDTTTPGRQTPLKFHGDNNNMSRFSSYEERNNKSSRKSGITSLKGVKGKSMSSVGRDKDKTIVEPEVLMTKEIEWSKYELRERDIRQGIDLATTLERIEKNFVISDPRLPDCPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQATVNRIRDAIKDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHLEPLRNRLSEGSEIQSAKLVKATAENVDGAVRELPDANLRPEDLWAIHSQAVSPRPHKRDNPSWVAIQKITARGEKIGLHHFSPIRPLGCGDTGSVHLVELQGTGELYAMKAMEKSVMLNRNKVHRACIEREIISLLDHPFLPTLYTSFQTDTHVCLITDFCPGGELFALLDRQPMKILKEDSARFYAAEVVIGLEYLHCLGIIYRDLKPENLLLQKDGHIVLTDFDLSFITSCKPQVVKQSLPGNRRRSRSQPPPIFVSEPVTQSNSFVGTEEYIAPEIITGARHTSAIDWWTLGILLYEMLYGRTPFRGKNRQKTFSNILHKDLTFPSSIPASLAARQLINALLQRDPASRLGSATGSNEIKQHPFFRGINWPLIRNMSPPPLDVPLQFIGKDPTAKDKKWEDDGVLNTSIDMDIF* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2221 935 MobiDBLite consensus disorder prediction 1 47 - -
Mtr8g2221 935 ProSitePatterns Protein kinases ATP-binding region signature. 605 628 IPR017441 GO:0005524
Mtr8g2221 935 CDD PAS 425 513 IPR000014 -
Mtr8g2221 935 SMART serkin_6 599 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2221 935 SMART pac_2 475 517 IPR001610 -
Mtr8g2221 935 SMART pac_2 191 233 IPR001610 -
Mtr8g2221 935 Pfam PAS domain 135 231 IPR000014 -
Mtr8g2221 935 Pfam PAS domain 421 513 IPR000014 -
Mtr8g2221 935 CDD STKc_phototropin_like 597 909 - -
Mtr8g2221 935 ProSiteProfiles Protein kinase domain profile. 599 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2221 935 SMART pas_2 400 469 IPR000014 -
Mtr8g2221 935 SMART pas_2 116 185 IPR000014 -
Mtr8g2221 935 Gene3D PAS domain 128 294 - -
Mtr8g2221 935 CDD PAS 141 230 IPR000014 -
Mtr8g2221 935 ProSiteProfiles PAS repeat profile. 398 471 IPR000014 -
Mtr8g2221 935 Pfam Protein kinase domain 602 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2221 935 MobiDBLite consensus disorder prediction 313 339 - -
Mtr8g2221 935 PANTHER BNAA02G07840D PROTEIN 78 934 - -
Mtr8g2221 935 SUPERFAMILY PYP-like sensor domain (PAS domain) 417 513 IPR035965 -
Mtr8g2221 935 MobiDBLite consensus disorder prediction 10 45 - -
Mtr8g2221 935 ProSiteProfiles PAC domain profile. 188 242 IPR000700 -
Mtr8g2221 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Mtr8g2221 935 Gene3D PAS domain 388 551 - -
Mtr8g2221 935 Gene3D Transferase(Phosphotransferase) domain 1 683 900 - -
Mtr8g2221 935 ProSiteProfiles PAS repeat profile. 114 187 IPR000014 -
Mtr8g2221 935 Gene3D Phosphorylase Kinase; domain 1 598 682 - -
Mtr8g2221 935 MobiDBLite consensus disorder prediction 313 367 - -
Mtr8g2221 935 PANTHER FLIPPASE KINASE 1-RELATED 78 934 - -
Mtr8g2221 935 ProSiteProfiles PAC domain profile. 472 526 IPR000700 -
Mtr8g2221 935 SUPERFAMILY Protein kinase-like (PK-like) 577 912 IPR011009 -
Mtr8g2221 935 SUPERFAMILY PYP-like sensor domain (PAS domain) 135 227 IPR035965 -
Mtr8g2221 935 MobiDBLite consensus disorder prediction 72 102 - -
Mtr8g2221 935 TIGRFAM sensory_box: PAS domain S-box protein 140 231 IPR000014 -
Mtr8g2221 935 TIGRFAM sensory_box: PAS domain S-box protein 425 513 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2221 Mtr-Chr8 32406244 32416449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2221 11 934 AGC Kinase Gene Family AT5G58140 71.321 0.0 1303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mtr8g2221 Pkinase 2.5e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2221 K20715 - gmx:100804783 1503.03