Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2210 ATGGCTCGTTCAGTGTCTTTGGTTTCCACCATCTTTGTCTTTTTTCTTCTTATTGTGGCCACTGAAATGGGGCCAAGTATGGTAGCAGCAAGGACTTGTGAGACTCCAAGTAACAGCTTCAAAGGAGCATGCTTCAGTGACACCAATTGTGCTTCTGTGTGCCAAACTGAGGGTTTCCCTGGAGGACACTGCAAAGGCTTCCGTCAGAGATGTTTTTGCACTAAACCTTGTTAA 234 0.4573 MARSVSLVSTIFVFFLLIVATEMGPSMVAARTCETPSNSFKGACFSDTNCASVCQTEGFPGGHCKGFRQRCFCTKPC* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2210 77 PANTHER DEFENSIN-LIKE PROTEIN P322 1 77 - -
Mtr8g2210 77 Pfam Gamma-thionin family 31 77 - -
Mtr8g2210 77 Gene3D - 31 77 IPR036574 -
Mtr8g2210 77 SUPERFAMILY Scorpion toxin-like 31 77 IPR036574 -
Mtr8g2210 77 SMART gth_4 32 77 IPR003614 GO:0006952
Mtr8g2210 77 PRINTS Purothionin signature 32 47 IPR008176 GO:0006952
Mtr8g2210 77 PRINTS Purothionin signature 62 76 IPR008176 GO:0006952
Mtr8g2210 77 ProSiteProfiles Invertebrate defensins family profile. 30 75 IPR001542 GO:0006952
Mtr8g2210 77 PANTHER DEFENSIN-LIKE PROTEIN 1 1 77 - -
Mtr8g2210 77 CDD Knot1 42 74 IPR003614 GO:0006952
Mtr8g2210 77 ProSitePatterns Gamma-thionins family signature. 31 54 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2210 Mtr-Chr8 32263102 32263733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2210 1 77 Plant Defensins Gene Families AT2G02100 55.844 2.78e-29 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2210 - - gsj:114420878 125.946