Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2206 ATGAATCCAATAGATCCTTTATCATTAACCCTTGAAACCCCTTCTATTACTTCCCCTTCTCAAACTTCTTCTCAACAAATCCCTAACATGTCAACCCTCAATCCCCAATTCACTCCCATTTACACCGGAGCACCACTTCAAACCATACTCGTCCCTAAACCTAAACTTTTTAATGATTTTTTCACCACCCAAGGTTCCCAACAACAACCTCATTTCCCTCCTGGATATGAGCACAATAGTCAACCTCATTTCCCTCCTGGATATGAACACACCAATCAATCTAACCTCTACACTAAGTACTATAACATTCTACAACCTTCCAATGCTACTTCCGATAAGTCCCTTTATCGTTCTCTCAAAATCGATGATTCCAGCAATGCTTCTGCCGCTTCAATGGAGAACTCAGTCAATATTTCTAACCTTGGACTAAATCAAAACCTTAATATGGGGGTGGATTTTGTGGATGATAGAAATGATCGATCTATTGTTCCCATTTCAAAGAAACAAGAATCATGTTCGACGGTAGCTCTGGTTAAGAAAAAGGCAAGTCAGATGCTTGTGAGGTATTCAGATCTGAGTATGAAGGATCAGATGCATTTTCGCAACGTGATGAGGAGAACAAGGATGACTTTTAATTCGCTACGTGTGTTGGCAAGTATTGATGATAAGAAAAGAATTATTGAGAAGAATAAATTGGCTGATGAAGTTTTTCTGGAGGCAGATAAGAGATTGGATGAGGATATGATATTTGTTTCTGAAGTTGCGATTATGGAGACGGAAATGGGAGCTGGTGATGAGAACAAGGAAGAGGCAGCAACATGGGTGGAGGGGAAAATGTCGAATGGAAGAAGACATCACCATCATATTCGTGGTGACATATGGGCTGCGAGGTTAATGAAGGACCGAGAGTTATGGTTGTATCGCGATAAAAGGATAGTTGGTTCGATACCTGGAGTTTATGTTGGTGATGTTTTCTTGTATATGGTGGAATTATGTGTAATTGGTTTGCATATGCAGATACAAGCTGGTATTGATTTTCTTCCTAAAAGTAGGTCTTCCAATGACGAGCCAATTGCTACTAGTGTGATTGTTTCAGGTGGTTATGAGGATGATATGGAATTGGACGATGGTGATGTAATAATCTATACCGGCCAAGGAGGAAGAAAGAAGAATTCCTCAATTCAAATTTGTGATCAGAAATTAGAGGGTGGAAACCTTGCTTTGGAGCGTAGTATGCATTACGGGATCGAGATTAGGGTTATTCGTGGGATGAAGTATGAAGGGGGTGCGACTAGCTCTGGTAAGGTTTATGTTTATGAAGGATTGTATAGGATTACTGATTGCTGGTTTGAAGAAGGGAAATATGGTTTTAGAGTTTTTAAGTATAAGTTATTGAGAGTTGAGGGGCAAGCTAAGATGGGCAGTGTTGTTCTTAAAGAGGCTAGGGAGATTAAGAAAATTGGGTTTGATGTTAAGCCTATGTATTGTCTTTCTGTTGATATTTCAAACAAGAGGGAGAATGTTCCTGTTAGGCTATTTAATGACATAGATGACAATCAAAAACCTCTTTCGTATGAGTATCTTCCGAAAACTACTTTTCCGCAGTTTGTGTTTCATCAAAGTGGGAAAACTACTGGTTGTGAATGTCAAGAGGCTTGTATTGATGACTGCTTTTGCTTTATGAGGAATGGAGGTGAGTTTCCTTATAATCTTCAGGGCTTGCTCGTGAAAGGGAAGCCTTTGATTTTTGAATGTGGCCCTTTTTGCTCCTGTCCTCCCAATTGTCGGAATCGTGTTGCACAAAAGGGGATCAAGCATATGTTTGAAGTGTTTAGGTCTGCGCAAACTGGTTGGGGAGTTAGGTCCTTGGACCTTATTCAGGCTGGAGCCTTTATCTGCGAGTATACCGGGGTAATTTTAACAAGGGAACAAGCTCAAATTTTAACAATGAATGGTGACTCGTTAATATATCCAAAAAGGTTTATGGATAGATGGGCAAAATGGGGGGATTTGTCTCAGATATACAATAATTATGTTCGTCCATCATATCCAGTAATACCTGATATAGATTATTCTATGGATATATCAACATTGCGAAATGTAGCTGGCTATTTGAGCCATAGTTCGAGTCCAAATGTATTTGTTCAGTTTGTTCTCTATGATCATGACAATCTGATGTTCCCCCATCTCATGCTATATGCAATGGAGAACATCCCTCCATTGAGAGAACTCAGCATAGACTATGGCATCCCTAACGAGTGGGCAGGAAAGCTATGA 2277 0.3988 MNPIDPLSLTLETPSITSPSQTSSQQIPNMSTLNPQFTPIYTGAPLQTILVPKPKLFNDFFTTQGSQQQPHFPPGYEHNSQPHFPPGYEHTNQSNLYTKYYNILQPSNATSDKSLYRSLKIDDSSNASAASMENSVNISNLGLNQNLNMGVDFVDDRNDRSIVPISKKQESCSTVALVKKKASQMLVRYSDLSMKDQMHFRNVMRRTRMTFNSLRVLASIDDKKRIIEKNKLADEVFLEADKRLDEDMIFVSEVAIMETEMGAGDENKEEAATWVEGKMSNGRRHHHHIRGDIWAARLMKDRELWLYRDKRIVGSIPGVYVGDVFLYMVELCVIGLHMQIQAGIDFLPKSRSSNDEPIATSVIVSGGYEDDMELDDGDVIIYTGQGGRKKNSSIQICDQKLEGGNLALERSMHYGIEIRVIRGMKYEGGATSSGKVYVYEGLYRITDCWFEEGKYGFRVFKYKLLRVEGQAKMGSVVLKEAREIKKIGFDVKPMYCLSVDISNKRENVPVRLFNDIDDNQKPLSYEYLPKTTFPQFVFHQSGKTTGCECQEACIDDCFCFMRNGGEFPYNLQGLLVKGKPLIFECGPFCSCPPNCRNRVAQKGIKHMFEVFRSAQTGWGVRSLDLIQAGAFICEYTGVILTREQAQILTMNGDSLIYPKRFMDRWAKWGDLSQIYNNYVRPSYPVIPDIDYSMDISTLRNVAGYLSHSSSPNVFVQFVLYDHDNLMFPHLMLYAMENIPPLRELSIDYGIPNEWAGKL* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2206 758 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 62 758 - -
Mtr8g2206 758 Pfam SAD/SRA domain 313 470 IPR003105 -
Mtr8g2206 758 SUPERFAMILY SET domain 491 751 IPR046341 -
Mtr8g2206 758 SMART set_7 606 755 IPR001214 GO:0005515
Mtr8g2206 758 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 62 758 - -
Mtr8g2206 758 MobiDBLite consensus disorder prediction 64 88 - -
Mtr8g2206 758 Pfam Pre-SET motif 501 598 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr8g2206 758 ProSiteProfiles YDG domain profile. 314 466 IPR003105 -
Mtr8g2206 758 Pfam SET domain 617 749 IPR001214 GO:0005515
Mtr8g2206 758 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 99 758 IPR025794 GO:0016571
Mtr8g2206 758 Gene3D SET domain 475 757 IPR046341 -
Mtr8g2206 758 MobiDBLite consensus disorder prediction 1 31 - -
Mtr8g2206 758 SMART G9a_1 309 470 IPR003105 -
Mtr8g2206 758 SUPERFAMILY PUA domain-like 295 479 IPR015947 -
Mtr8g2206 758 SMART preset_2 498 590 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr8g2206 758 Gene3D - 311 474 IPR036987 -
Mtr8g2206 758 ProSiteProfiles Pre-SET domain profile. 545 603 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr8g2206 758 ProSiteProfiles SET domain profile. 606 749 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2206 Mtr-Chr8 32212071 32214624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2206 310 750 Su(var)3-9 homologs AT5G04940 38.210 1.04e-95 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr8g2206 SAD_SRA 4.8e-46 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2206 K11420 - aip:107626851 815.453