Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2190 ATGAGGGGTGGAAAAAATAGGAAGCTACATTTAAGCAAGATTTATTCATTCACATGTTTCAAAGCAAGTTCTGTTGATGGAGATCATTCACAAATTGGTAGTAAAGGTTATTCAAGAGTGGTGTTATGCAATGAACACGACACTACTACTACTACTACTACTACTGCTACTGCTTCTGAGGAAGCTGTGATAAGGAATTTTGCAGATAATTATGTTAGATCTACAAAATATACTGCTGCAACTTTCTTTCCAAAATCACTTTTTGAACAGTTTAGGAGAGTTGCAAATTTCTATTTTTTGGTTACTGGTGTTTTGGCTTTCACAAAACTTGCTCCTTATAGAGCTGTTACTGCTATTCTTCCTCTTGTTGTTGTTATTGGAGCAACTATTGTGAAAGAAGGTATTGAAGATTGGCGTAGGAAAAAGCAGGATATTGAGGTGAACAATAGAAGAGTTAAAGTTCATAAAGTTGATGGCATTTTTGAATATACTGCATGGAAGAATCTGAGGGTAGGAAATATAGTGAAGGTAGAGAAGAATGAGTTCTTCCCAGCGGATCTCTTATTGCTTTCATCGAGTTATGAAGATGCAGTTTGCTATGTTGAGACCATGAACTTAGACGGCGAGACAAATTTGAAGCTAAAACAAGGTTTAGAGGTAACATCTTCCTTACATGAGGATCTCAACTTCAAAAAATTTAAAGCTACTGTCAAATGTGAAGATCCAAATGCAAATCTGTACTCGTTTGTTGGGAGCTTGGAGTTTGAAGGTCAAAACTATGCCCTTTCCCCACAGCAACTTCTTCTGCGAGACTCTAAACTTCGTAATACAGACTATATTTTCGGAGCTGTTATCTTCACTGGTCATGAGACTAAGGTTATTCAGAACTCTACTGATCCACCTTCAAAAAGAAGCCGAGTTGAGAGGAAGATGGATAGAGTCATTTACTTCTTGTTCTGTATTTTGTTTCTAATGGCATCCGTGGGATCTATTTTCTTTGGCTTTATAACTAAAGATGACTTGAACAACGATTCGGTGAAAAGATGGTATTTAAGGCCTGACGACTCTACAATTTTCTTTGATCCAAAAAGACCGGCTGCTGCTGCTATATTTCATTGTTTGACAGCCTTAATGTTGTATGGTTTCTTTATTCCCATCTCTTTGTATGTGTCAATAGAAATTGTAAAAGTCCTTCAGAGCATTTTCATCAATCAAGATATCCATATGTACTACAAGGAAGCAGACAAACCGGCACATGCTCGCACTTCAAACTTGAACGAGGAGCTCGGTCAAGTTGACACAATACTTTCTGATAAAACTGGAACTTTGACCTGCAACTCGATGGAATTCATCAAATGTTCGATCGCTGGTGTAGCTTATGGTCGTGGTGTTACAGAAGTTGAGAAAACCATGGATAGAAGAAAAAGTTCATCGTTAGTTCACGAGTGTGATATATCTGAAGAAGATCACATCAGGGTTTCTCTTGATAAAAAAGCAGCCATTAAAAGTTTTAACTTTACTGATGAAAGAATAATGAATGGTAACTGGGTTAATGAACCTCATGCAGATGTTATCCAGAAGTTTTTTCGTCTATTGGCCGTATGTCATACAGCCATACCAGAAATAGATCAAGAGACAGGAAATGTCTCCTACGAGGCTGAATCTCCGGATGAAGCTGCATTTGTTATTGCGGCGAGAGAAATTGGTTTTGAATTCTTCAAAAGGGCTCAGACCAGTTTATCGACATGTGAGTTGGATCCAGTTTCAGGCAAGAAAGTTGAAAGGATGTACAAGATTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGAGAATGTCGGTAATAGTACAAGATGGCGAAGGGAAAATTTTATTACTCTGTAAAGGTGCCGATAGTGTCATGTTTGAAAGACTTGCCAAGAATGGAAGGGAGTTTGAAGAGAAAACCATGGAACATGTGCATGAATATGCCGATGCAGGTCTAAGAACCCTTATACTCGCCTATCGTGAACTTGCAGCAGAGGAATACAAGGAGTTTGATAACACATTCTCTGAGGCCAAGAATTTAGTTAGTGCAGATCGGGAAACACTGATTGAGGAAGTATCGGATAATATTGAGAAGAACCTAATCCTTCTTGGTGCTACTGCTGTAGAGGACAAGCTCCAAGATGGGGTTCCTGATTGCATTGACAAGCTTGCCCAAGCAGGAATTAAGATTTGGGTTTTGACTGGGGATAAAATGGAAACTGCTATCAATATTGGCTTTGCTTGTAGTTTGCTTAGACAAGGAATGAAACAGATTATAATTCATTTGGATAATCCAGAAATTCAAGCTCTGGAGAAAGATGGCGACAAAATAGCTATTACCAAGACATCAAGGCAAAGTGTCCTCTCTCAGTTACGTGAAGGTGCTGCACAGCTTAGTGCACACAGAGGGTTTTCTCAGCAGGCATTTGCGCTAATCATTGATGGGAAGTCACTTGCTTATGCACTTGAGGATGATATGAAGAACATGTTTCTCGAGCTTGCAATTCGTTGTGCATCTGTTATTTGTTGTCGTTCATCGCCAAAACAGAAGGCGCTGGTCACTAGATTGGTCAAATCTGGAACCGGGAAAACAACATTAGCTATCGGCGATGGAGCTAACGATGTTGGAATGCTTCAAGAAGCTGATATCGGAGTTGGTATAAGTGGTGTTGAAGGAATGCAGGCTGTTATGTCTAGTGATATTGCAATTGCACAATTCCGATATTTGGAACGATTACTTCTGGTGCACGGCCATTGGTGTTACCGGAGGATCTCATCGATGATATGCTATTTTTTCTACAAGAATGTCACATTTGGTTTCACTCTATTCTTGTATGAGGTGTATGCATCATTCTCCGGAGAACCTGCATACAACGACTGGTTTTTAGCTCTCTATAACGTCTTCTTTTCATCACTTCCTGTGGTCGCTCTTGGTGTATTCGACCAAGACGTATCTGCTCGGTACTGCCTCAAGTTTCCTTTGTTATATCAAGAAGGAGTGCAAAATGTCCTTTTCAGCTGGCGTCGAGTACTCAGCTGGATGCTTAACGGATTCTTTAGCGCCTTATTAATTTTCTTCTTCTGCACCAAAGCCATGGAGCTCCAAGCTTTTGATCACGAGGGAAATACTGCCGGAAGAGAAATACTTGGAACAACCATGTACACTTGCGTAGTTTGGGTTGTAAACTTGCAAATGGCATTATCTATAAGTTACTTCACCTTGATCCAACATTTTTTCATCTGGGGTTCCATTTTCTTCTGGTACATTTTTCTCATAATCTATGGATCACTTCCTCCAAGGTTTTCGGAAAACGCTTACGCAGTCTTCGTTGAAGCTCTTGCTCCTTCGTCTTCCTATTGGATAGTCACATTCTTTGTGGTGATCTCAACTCTTATACCATACTTCTCATACAAAGCAATTCAGATGCGGTTCTTTCCAATGTATCACGAAATGGTACAGTGGATAAGGTATGAAGGGAAGACTGAGGATCCTGAGTACTGTGCTATGGTCCGGCAAATATCATTGCAGCCAATGACTGTCGGTTCAACTGCTCGCTTAGCTGCCAAGGCAAACCAATTGTCGGACAAAATTATTAAACATAGATAA 3633 0.398 MRGGKNRKLHLSKIYSFTCFKASSVDGDHSQIGSKGYSRVVLCNEHDTTTTTTTTATASEEAVIRNFADNYVRSTKYTAATFFPKSLFEQFRRVANFYFLVTGVLAFTKLAPYRAVTAILPLVVVIGATIVKEGIEDWRRKKQDIEVNNRRVKVHKVDGIFEYTAWKNLRVGNIVKVEKNEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSSLHEDLNFKKFKATVKCEDPNANLYSFVGSLEFEGQNYALSPQQLLLRDSKLRNTDYIFGAVIFTGHETKVIQNSTDPPSKRSRVERKMDRVIYFLFCILFLMASVGSIFFGFITKDDLNNDSVKRWYLRPDDSTIFFDPKRPAAAAIFHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYKEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEKTMDRRKSSSLVHECDISEEDHIRVSLDKKAAIKSFNFTDERIMNGNWVNEPHADVIQKFFRLLAVCHTAIPEIDQETGNVSYEAESPDEAAFVIAAREIGFEFFKRAQTSLSTCELDPVSGKKVERMYKILNVLEFNSSRKRMSVIVQDGEGKILLLCKGADSVMFERLAKNGREFEEKTMEHVHEYADAGLRTLILAYRELAAEEYKEFDNTFSEAKNLVSADRETLIEEVSDNIEKNLILLGATAVEDKLQDGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLDNPEIQALEKDGDKIAITKTSRQSVLSQLREGAAQLSAHRGFSQQAFALIIDGKSLAYALEDDMKNMFLELAIRCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNVTFGFTLFLYEVYASFSGEPAYNDWFLALYNVFFSSLPVVALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRVLSWMLNGFFSALLIFFFCTKAMELQAFDHEGNTAGREILGTTMYTCVVWVVNLQMALSISYFTLIQHFFIWGSIFFWYIFLIIYGSLPPRFSENAYAVFVEALAPSSSYWIVTFFVVISTLIPYFSYKAIQMRFFPMYHEMVQWIRYEGKTEDPEYCAMVRQISLQPMTVGSTARLAAKANQLSDKIIKHR* 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2190 1210 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 511 714 IPR023299 GO:0000166
Mtr8g2190 1210 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 67 1162 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Mtr8g2190 1210 Pfam Cation transport ATPase (P-type) 544 638 - -
Mtr8g2190 1210 Gene3D - 713 917 IPR023214 -
Mtr8g2190 1210 SFLD C1.7: P-type atpase like 418 928 - -
Mtr8g2190 1210 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1206 - -
Mtr8g2190 1210 SUPERFAMILY Calcium ATPase, transmembrane domain M 63 1155 IPR023298 -
Mtr8g2190 1210 SUPERFAMILY Calcium ATPase, transduction domain A 153 295 IPR008250 -
Mtr8g2190 1210 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1206 - -
Mtr8g2190 1210 SUPERFAMILY HAD-like 431 932 IPR036412 -
Mtr8g2190 1210 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 848 959 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g2190 1210 Pfam Phospholipid-translocating P-type ATPase C-terminal 905 1155 IPR032630 -
Mtr8g2190 1210 ProSitePatterns E1-E2 ATPases phosphorylation site. 438 444 IPR018303 -
Mtr8g2190 1210 Gene3D - 557 712 IPR023299 GO:0000166
Mtr8g2190 1210 CDD P-type_ATPase_APLT_Dnf-like 69 1037 - -
Mtr8g2190 1210 Pfam Phospholipid-translocating ATPase N-terminal 64 119 IPR032631 -
Mtr8g2190 1210 SFLD p-type atpase 418 928 IPR044492 -
Mtr8g2190 1210 Gene3D - 129 298 - -
Mtr8g2190 1210 PRINTS P-type cation-transporting ATPase superfamily signature 436 450 - -
Mtr8g2190 1210 PRINTS P-type cation-transporting ATPase superfamily signature 877 896 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2190 Mtr-Chr8 32044707 32053026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2190 1 1198 Primary Pumps ATPases AT1G68710 73.252 0.0 1881
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2190 K01530 - gmx:100781421 2062.73