Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2163 ATGGCTATGCAATCACCTTCCTCTTCCTCTTCAATCTCATATGGATTCACTTACCAGGTCTTCCTCAACTTTAGAGGCGGTGACACTCGTGACGGTTTTATTGGCCATCTCTACAAGACTCTTACTGACAAGGGAATCCACACCTTCATTGATGATCGTGAACTTCAAAGAGGGGATGAAATCAAATCATCACTCGACAATGTCATTGAAGAGTCTAGAATTTTTATTCCTGTGTTTTCTATCAACTATGCCTCTTCTTCATTTTGTTTGGACGAACTTGTCCACATCATTCACTGCTACAAGACAAAGGGTCGTCTCATTTTGCCTGTCTTCTATGGCGTGGATCCTACTCACATACGACATCAAAGTGGGAGTTATGGTGAACATCTCACTAAGTACGAAGAGAGTTTCCAAAATAGCAAGAAAAACATGGAACGGTTGCATCAATGGAAGTTGGCTCTGACCCAAGCTTCTAACTTGTCTGGCTACCATTCTAGTCATGGATATGAATACAAGTTTATCGGAGAGATAGTCAAATACATCTCCAACAAGATCAGCCGCGTGCCCTTACATGTTGCCAAATACCCTGTTGGATTACAGTCTCAAGTACAACAAGTCAAATCGCTTCTTGATAATGGATCTGATGATGGGATCCATATGGTTGGAATTTATGGGATTGGTGGCTTGGGTAAATCAACCCTTGCAAGAGCAATCTATAATTTTTTTGCTGATCAATTTGAAGATTTATGTTTTCTTCATGATGTGAGAGAGAATTCAGCTAAAAATAACTTGAAACATCTCCAAGAGAAACTCCTTTTAAAAACAACTGGATTGGAAATTAAGTTAGATCATGTTAGTGAGGGGATTCCAATTATAAAGGAGAGGCTAAGTAGAAAGAAAATTCTTTTGATTCTCGATGATGTTGATAATTTGAAGCAACTACATGCTTTGGCTGGAGGACATGATTGGTTCGGCCGTGGAAGCAAAGTCATCATTACTACTCGAGACAAACACTTGCTAACTTGTCATGGGATAAAAAGTATGCATGAAGTAGAAGGGCTGTATGGGACAAAAGCTCTTGAATTGTTGAGGTGGATGGCTTTTAAGAATAACAAAGTACCTTCAATTTATGAAGACGTTTTAAATCGTGCAGTTTCATATGCTTCGGGCCTTCCCTTAGTTTTAGAAATAGTGGGTTCCAACTTGTTTGGAAAGAGGATAGAAGAATGGAAGGGTACATTAGATGGATATGAAAAGATTCCCAATAAAAGGATCCACCAGATACTTAAAGTAAGTTATGATGCTTTGGAAGAAGAGCAACAAAGTGTCTTTCTGGACATTGCTTGTTGCTTCAAAGGTTGTGAATGGGAAGATGCCAAATATATACTTCATTCTCATTATGGCCATTGCATAACACATCATCTAGGAGTATTGGCTGAAAAATCTCTCATAGACCAATATTGGGAATATGGCCATTATGTAATGTTGCATGATTTGATAGGGGACATGGGTAAAGAAGTCGTCCGACAAGAATCAATTAAAGAGCCTGGAGAAAGAAGTAGGTTATGCTGCCAGGATGATCTAGTTCGTGTTTTAAGAGAAAACACTGGAACTAGTAAAATTGAAATGATATATACGAATCTCCATTCCATAGAATCTGTGATAGACAAGAAAGGAAAGGCCTTCAAGAAGATGACAAAACTCAAAACAGTTATCTTCGAAAATGGCCATTTTTCTGGAGGTCTCAAGCATTTACCAAGAAGTTTGAGTGTATTGAAATGGAAAGGATGTTTATCGAAGTGTCTGTCATCTAGTATTTTAAACAAGAAGTTTCAGGATATGAAAGTCTTGATATTGGACCGATGTGAATACTTAACACATATCCCCGATGTCTCAGGCCTTTCAAATTTAGAAAAGTTATCGTTTGAAAATTGTGATAATTTAACTACAATTCACAATTCGATTGGACACCTAAATAAACTTGAAAGGTTAAGTGCATATGCTTGCAAAAAGCTCAAACATTTTCCACCTTTAGGTTTGGCATCTCTTAAGGAATTGAATCTCAGTGGTTGTGTGAGTCTCGATAGTTTTCCAGAATTATTATGCAAGATGAAAAATATAGACAATATTTTGTTGCATCATACTTTCATTGCAGAACTTCCATTTTCATTTCAAAATCTCAGTGAACTTCATGAGTTATCAGTGAAAGCTGGAATGCTGAGCTTCCCAAAACATAATGATAAGATGTATTCAATAGTGTTCCCAAATGTGACACATCTTACTCTCGACGATTGCGACTTCTCAGATGAATGTCTCCCAATACTTCTCAAGTGGTGTGTTAATGTGACATATCTAGACTTATCATTTAACTATTTCAAAATTCTTCCTGAGTGCCTTAGTGAATGTCTCCATCTTTATAAAATTAATATGAGTGGCTGCCATTCTCTTAAGGAAATTAGAGGGATTCCACCAAATCTAAAAGAGCTTTCTGTTGAATATTGTGAATCATTGAGTTCCTCAAGTAAAAGAATGTTAATGAGTCAGAAACTACATGAGACTGGATGCACCTATATTCAATTTGAAAATGGAACAGAGCAGGGGATACCAGATTGGTTCGAACACCAAAGCAGGGGACCCACAATTTCTTTCTGGTTTCGTAAAGAAATCCCTTCTATTACTTGTATTTTTATGCTTCCGGAAGGCAATAATTGGGTGCTTGAGTCAGGAGTCAATTTTTGTGTGAATGGATATGAAATTGAGATAGATTGTTGTAGGTATGTGATCTGGAACCATACAACTTTGTTTCATACCTCAAAATTGAATGAACTCATTAAAACACAATGCGAGAAAGGACTTTTGAAAAATGAATGGATCCATGTGGAGTTTAAGTTGGATGATTGGACTTTGGAACAATTTAGTGAGGAAGAGAATAATAAAATATTAAGTGGTGTTCAAATGGGAATCCACGTGTGGAATGAGAAAAGCAACACGGATGAGGAGAATGTGGTATTCACAGATCCTTATCTCAATTATAGCAATAATACTTCATTATCACAATTTGTGCCTCCTCTAAAAAAGCAAAGATTGGTGGAAGTGGGAGTTTCAGAGACAGAGGAGGATATCAATGCTTCATTGCAACAACAGGATTTGACGAAAGAGGAACAAAGAAAGACATGGGGTACATACCTTAGTCTAGGTCCATTATAA 3207 0.372 MAMQSPSSSSSISYGFTYQVFLNFRGGDTRDGFIGHLYKTLTDKGIHTFIDDRELQRGDEIKSSLDNVIEESRIFIPVFSINYASSSFCLDELVHIIHCYKTKGRLILPVFYGVDPTHIRHQSGSYGEHLTKYEESFQNSKKNMERLHQWKLALTQASNLSGYHSSHGYEYKFIGEIVKYISNKISRVPLHVAKYPVGLQSQVQQVKSLLDNGSDDGIHMVGIYGIGGLGKSTLARAIYNFFADQFEDLCFLHDVRENSAKNNLKHLQEKLLLKTTGLEIKLDHVSEGIPIIKERLSRKKILLILDDVDNLKQLHALAGGHDWFGRGSKVIITTRDKHLLTCHGIKSMHEVEGLYGTKALELLRWMAFKNNKVPSIYEDVLNRAVSYASGLPLVLEIVGSNLFGKRIEEWKGTLDGYEKIPNKRIHQILKVSYDALEEEQQSVFLDIACCFKGCEWEDAKYILHSHYGHCITHHLGVLAEKSLIDQYWEYGHYVMLHDLIGDMGKEVVRQESIKEPGERSRLCCQDDLVRVLRENTGTSKIEMIYTNLHSIESVIDKKGKAFKKMTKLKTVIFENGHFSGGLKHLPRSLSVLKWKGCLSKCLSSSILNKKFQDMKVLILDRCEYLTHIPDVSGLSNLEKLSFENCDNLTTIHNSIGHLNKLERLSAYACKKLKHFPPLGLASLKELNLSGCVSLDSFPELLCKMKNIDNILLHHTFIAELPFSFQNLSELHELSVKAGMLSFPKHNDKMYSIVFPNVTHLTLDDCDFSDECLPILLKWCVNVTYLDLSFNYFKILPECLSECLHLYKINMSGCHSLKEIRGIPPNLKELSVEYCESLSSSSKRMLMSQKLHETGCTYIQFENGTEQGIPDWFEHQSRGPTISFWFRKEIPSITCIFMLPEGNNWVLESGVNFCVNGYEIEIDCCRYVIWNHTTLFHTSKLNELIKTQCEKGLLKNEWIHVEFKLDDWTLEQFSEEENNKILSGVQMGIHVWNEKSNTDEENVVFTDPYLNYSNNTSLSQFVPPLKKQRLVEVGVSETEEDINASLQQQDLTKEEQRKTWGTYLSLGPL* 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2163 1068 Gene3D - 13 183 IPR035897 -
Mtr8g2163 1068 PRINTS Disease resistance protein signature 220 235 - -
Mtr8g2163 1068 PRINTS Disease resistance protein signature 295 309 - -
Mtr8g2163 1068 PRINTS Disease resistance protein signature 388 402 - -
Mtr8g2163 1068 PRINTS Disease resistance protein signature 678 694 - -
Mtr8g2163 1068 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 964 IPR044974 GO:0006952
Mtr8g2163 1068 Gene3D Ribonuclease Inhibitor 752 859 IPR032675 -
Mtr8g2163 1068 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Mtr8g2163 1068 SUPERFAMILY L domain-like 558 856 - -
Mtr8g2163 1068 Gene3D - 184 347 IPR027417 -
Mtr8g2163 1068 Gene3D - 354 437 IPR042197 -
Mtr8g2163 1068 Pfam NB-ARC domain 201 436 IPR002182 GO:0043531
Mtr8g2163 1068 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 447 IPR027417 -
Mtr8g2163 1068 SMART till_3 17 160 IPR000157 GO:0007165
Mtr8g2163 1068 CDD AAA 197 336 - -
Mtr8g2163 1068 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 163 IPR035897 -
Mtr8g2163 1068 PANTHER ARCHAEAL ATPASE 28 964 - -
Mtr8g2163 1068 Gene3D Ribonuclease Inhibitor 532 751 IPR032675 -
Mtr8g2163 1068 SUPERFAMILY "Winged helix" DNA-binding domain 424 532 IPR036390 -
Mtr8g2163 1068 Pfam TIR domain 18 186 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2163 Mtr-Chr8 31723972 31729073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2163 18 800 WRKY Transcription Factor Family AT4G12020 27.838 3.73e-64 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2163 - - mtr:MTR_6g071935 1372.07