Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2162 ATGGATTTTACGGAAAAAACGAAAACGCCACATCCTCCAATGAATCAAAAACTTCACTATTCCCCGTCTTCCCTATCACAAATTCTTCTCTTCAAATCACGACTTCTTCGGTTTCTCAATAAGATACCAGCTTTGTTCATCCCTAAGTGTGAGTTAATCTTCAGACACTTGTTGTTCAGAATTGGCTTTGAGGAGGAGAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGCCGCTATCATGTCACCGAGTATTTGGGAGCTGCTGCATTTAGTAAAGCCTTACAAGCTCATGACATGCACACAGGTGTGGATGTTTGTATTAAAATTATAAAGAACAACAAGGATTTCTTTGATCAAAGCCTTGATGAAATCAAACTTCTCAAGCATGTTAACAAGCATGATCCTGGAGACAAGTATCACATTTTGCGATTATATGATTATTTCTATTTCAGAGAACATTTGTTAATAGTGTGTGAACTACTCAAAGCCAACTTATACGAGTTTGATAAATTTAACAGAGAATCAGGAGCAGAAGTTTACTTCACAATGCCAAGGCTGCAGGTTTGTGGAGTTCTGCTCACATTCTGA 594 0.3737 MDFTEKTKTPHPPMNQKLHYSPSSLSQILLFKSRLLRFLNKIPALFIPKCELIFRHLLFRIGFEEEKNFHVVLNSVIAGRYHVTEYLGAAAFSKALQAHDMHTGVDVCIKIIKNNKDFFDQSLDEIKLLKHVNKHDPGDKYHILRLYDYFYFREHLLIVCELLKANLYEFDKFNRESGAEVYFTMPRLQVCGVLLTF* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2162 197 SUPERFAMILY Protein kinase-like (PK-like) 69 174 IPR011009 -
Mtr8g2162 197 Pfam Protein kinase domain 81 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2162 197 Gene3D Phosphorylase Kinase; domain 1 62 162 - -
Mtr8g2162 197 PANTHER DUAL SPECIFICITY PROTEIN KINASE 51 190 - -
Mtr8g2162 197 PANTHER - 51 190 - -
Mtr8g2162 197 ProSiteProfiles Protein kinase domain profile. 81 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2162 Mtr-Chr8 31718444 31719781 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2162 79 174 EF-hand Containing Proteins AT5G22840 31.000 4.59e-07 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Mtr8g2162 Pkinase 9.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2162 - - mtr:MTR_8g069620 290.041