Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2134 ATGACATGGTGCAATGACTCAGATGATCAAGATAGGGGCATTGAACTAATAACATCTACTGTTATTCCTGGAACTAGCAATGAAAGTCCTCTTGTTACAGATGATGAAACAAAACCAACCGAAGTTCGAACTCTAACTTGCCCCTCATGTGGCCATAACATTGAATTTCAAGATCAGGGTGGAATCAATGAACTGCCGGGTTTACCGGCAGGAGTGAAGTTTGATCCGAATGATCAAGAGATACTTCAGCATTTGGAAGCAAAGGTTCTGTTTGATGTGCCCAAACTTCATCCTCTTATTGATGAGTTCATACCAACACTTGAAGGAGAGAACGGAATCTGTTATACACATCCAGAAAAGCTACCAGGTGTAAAAAAAGATGGACAGATCCGGCACTTTTTTCACAGGCCATCTAAAGCATACACAACAGGAACAAGGAAAAGAAGAAAGGTTCAAACTGATGAAGAAGGAAGTGAAACAAGATGGCACAAAACAGGGAAAACTAGACCAGTTATTATTGATGGTGTTATGAAAGGTTTCAAGAAGATACTAGTCCTCTACACCAACTATGGAAGGCAAAAGAAGCCTGAGAAGACCAATTGGGTGATGCATCAATACCACCTTGGTAGTAATGAAGAAGAGAAAGATGGTGAATTAGTTGTTTCAAAGAAGATACTAGAATATCTCTCGTCCAGTGAGCGACGATTAGCTTGCAATTCAGTAATACGGTTCATGTATTCATCAGTTAATTTCTTCTTATCGTTGATGGCATCCTCATAG 780 0.3987 MTWCNDSDDQDRGIELITSTVIPGTSNESPLVTDDETKPTEVRTLTCPSCGHNIEFQDQGGINELPGLPAGVKFDPNDQEILQHLEAKVLFDVPKLHPLIDEFIPTLEGENGICYTHPEKLPGVKKDGQIRHFFHRPSKAYTTGTRKRRKVQTDEEGSETRWHKTGKTRPVIIDGVMKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKKILEYLSSSERRLACNSVIRFMYSSVNFFLSLMASS* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2134 259 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 227 - -
Mtr8g2134 259 SUPERFAMILY NAC domain 64 223 IPR036093 GO:0003677|GO:0006355
Mtr8g2134 259 Pfam No apical meristem (NAM) protein 69 208 IPR003441 GO:0003677|GO:0006355
Mtr8g2134 259 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 227 IPR044799 GO:0003700
Mtr8g2134 259 MobiDBLite consensus disorder prediction 141 163 - -
Mtr8g2134 259 ProSiteProfiles NAC domain profile. 68 227 IPR003441 GO:0003677|GO:0006355
Mtr8g2134 259 MobiDBLite consensus disorder prediction 147 163 - -
Mtr8g2134 259 Gene3D NAC domain 77 229 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2134 Mtr-Chr8 31394916 31398932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2134 1 223 NAC Transcription Factor Family AT4G28500 70.089 1.90e-110 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr8g2134 NAM 1.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2134 - - mtr:MTR_8g069160 537.724