Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2133 ATGACAATAGCTCAATCCTCCCCTTCCAAACTCATCACCTCAATCCTCCCCTTCCAAACTCACTCTCTCACTAAAATGGAAGAACAACAAGACCCACCCACTCTCACACTCCAAATCCTCGCCGGTCCACGCAACGGAGAAACCCACCAATTCGAACCTGGATCCACCGTCAAAATCGGTCGTGTCATCCGCGGCAACAACCTCCCCATCAAAGATCCAGGTATTTCCACCAAACACCTCACTATCCATTTCGATTCCGGTAATTGGATTCTCACAGATCTCGATTCCTCTAACGGCACCGTTTTGGACAACGAACCTGTTCCTCCGAATACTCCTTTTCATCTCTGCGATGGTTCCACCATTAAGATCGGTGAAGTTACTTCCATCCTTGTCAATTTCATCAATCCCCAAAGTAAACCTACGGAAACCATGGTAGAAGATAAACCAATGAAGGGTAAAAAAGGGAATAGTGGTAAAAGTGTTAAATTTAGGGTTCCGGTACAGAGTATTGATGAAGATGGAATGTTGAATGGTGATGATGAAGATGGAATTGTGGATCGACCTGAACCAACGAAGGTTACGAGGAATACGCGGAGCAGGAAAATTGTTACTGATTCTACTAATGTGAATTTGGATCCTGTAGAACCGAAGAATGCTAGGGCCACGAGGAATTCGAAGAATAAGAAGAATGCTGTTGAGATTTGTGATTCCAGTAATGGTAATTTGGATGATGTGAAGGAGAAAGTAGAAGAAGTGAAGAAGAATGTGAGGGTGACAAGGAATTCGAAGAATAAGAAGAATGTGGCTAAAATTTGTGATTCAAGTAATGGAGATTTGGAGGGTGTGAAGGAGAAGGTGGAGGAAGTAAAGAAAAATGTGAGGGTGACAAGGAATTTGAGGAATAAGATAAATAAAATGGGGGTTTCTGAATTGAGTGTTGGGGATTTGGATGGTGTGAAAGAGAAGGTGGAGGAGCCGAGGAGTGTGAGGATGACAAGGAATGTGAAGAATAAAGGGGTTGTAATTGGGGAAGATTTGAGCTTGGTGGATGGAGTGGAGAATGTTGAGAAAAAGAAAACGAGGGGTTGTGCTAAGGGGAAGAGGAAGTTGCGGGAAGAAATTGTTGGTGATGGAGATGGTAAAGAGAATTGTGATGATGCTGAAGAAAAGGAGAAATTGGAGGAAGAGTGTGTTGGTGATAAAGAAAAGGAGAAGTTACCGGAAGAGCGTGTTGGTGATGGAGAAGATAAAGAGAAGGAGAAATTACCGGAAGAGTGTGTTGGTGACGAAGAAGATAAAGAAAAGGATAAATTACAGGAAGAGTGTGTTGGTGATGAAGAAGATAAAGAGAAGGAGAAATCACAAGAGTGTGTTGGTGATGGAGTTGGTAAAAAGATTTATGATGCGAAAGAAAAGGAGAATTTGAATGGGGATGAGAATTGGCCTGATTTGGAGAAGATGAATTTAGGTTGA 1473 0.4236 MTIAQSSPSKLITSILPFQTHSLTKMEEQQDPPTLTLQILAGPRNGETHQFEPGSTVKIGRVIRGNNLPIKDPGISTKHLTIHFDSGNWILTDLDSSNGTVLDNEPVPPNTPFHLCDGSTIKIGEVTSILVNFINPQSKPTETMVEDKPMKGKKGNSGKSVKFRVPVQSIDEDGMLNGDDEDGIVDRPEPTKVTRNTRSRKIVTDSTNVNLDPVEPKNARATRNSKNKKNAVEICDSSNGNLDDVKEKVEEVKKNVRVTRNSKNKKNVAKICDSSNGDLEGVKEKVEEVKKNVRVTRNLRNKINKMGVSELSVGDLDGVKEKVEEPRSVRMTRNVKNKGVVIGEDLSLVDGVENVEKKKTRGCAKGKRKLREEIVGDGDGKENCDDAEEKEKLEEECVGDKEKEKLPEERVGDGEDKEKEKLPEECVGDEEDKEKDKLQEECVGDEEDKEKEKSQECVGDGVGKKIYDAKEKENLNGDENWPDLEKMNLG* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2133 490 Coils Coil 435 455 - -
Mtr8g2133 490 MobiDBLite consensus disorder prediction 471 490 - -
Mtr8g2133 490 MobiDBLite consensus disorder prediction 376 458 - -
Mtr8g2133 490 Pfam FHA domain 57 124 IPR000253 GO:0005515
Mtr8g2133 490 MobiDBLite consensus disorder prediction 140 159 - -
Mtr8g2133 490 PANTHER F16B3.3 PROTEIN 31 433 - -
Mtr8g2133 490 ProSiteProfiles Forkhead-associated (FHA) domain profile. 57 107 IPR000253 GO:0005515
Mtr8g2133 490 MobiDBLite consensus disorder prediction 180 197 - -
Mtr8g2133 490 PANTHER NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 31 433 - -
Mtr8g2133 490 Coils Coil 235 262 - -
Mtr8g2133 490 SMART FHA_2 56 107 IPR000253 GO:0005515
Mtr8g2133 490 Gene3D - 25 139 - -
Mtr8g2133 490 MobiDBLite consensus disorder prediction 172 197 - -
Mtr8g2133 490 CDD FHA 35 135 IPR000253 GO:0005515
Mtr8g2133 490 Coils Coil 272 299 - -
Mtr8g2133 490 SUPERFAMILY SMAD/FHA domain 29 133 IPR008984 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2133 Mtr-Chr8 31390158 31394201 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2133 35 155 PP2C-type Phosphatase Gene Family AT5G19280 29.710 5.56e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2133 - - mtr:MTR_4g088235 826.239