Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2128 ATGGAAGAGACCGATGATAACTCTGATTTATCAAGCTTGATGTGCTTTGAAAACATCTCTGAATGCTTAGATAATTATGAAAGTGATGTTGATGACGAGTCTAGTCTTTCATTTAACAATCCATGTTTGAGTTATAACAACATTGGATCAGAAAATTTGTTGGCTTTTCGCGAACTTATAAATGAAACTGTTTTGTCTTTGGTTAAAAGAGAAAGCGAACATTTACCTCGTGATGATTATCTTGAGAGGCTTCGTGGTGAGGACATAAACTTAAAATTTAGGGACTTAAACTTGAACATGAACTTGAACTTGAATGGTATTAGGAGGGAGGCTATTGAGTGGATGTGGAAGGCTGCTGCATGTTATGGTTTTGGACCCTGTATTTTTTCTCTTGCTGTGAACTACGTAGATCGTTTCCTATCTGTATACAAATTTGAAAGAGGCCATCTTTGGAGTGAGAAATTGTTGGCTTTAGCATGTTTGTCAATTGCTGCTAAACTGGAGGAGGGTAAAAAATTGCCTAAATCAATAGACTTTAAGTTAGGAGAATTAGTGTTTGTATTTGAAACTAAAGGCATTACAACAATGGAGCTATTGATATTAGATCACTTGAATTGGGAAATGCAATCTTCAACTCCATGTTCTTTTGTGGATTACTTCCTTAGTAAGATTACTTCTGAGCAGCAGTTTCCGTCAGGGTCGTCCATGTTGAATTCAATAGACCTTATTCTTAAGATGCCTAAATATATTGATTTCTTGGAATTTAAGCCTTCTGAAATTGCTGCGGCAACTGCAATTTGTGTTTCAAAGGAGTTGGAAACAAATGGGATTGATGAAGTCTTGACTCGTTTTGCTATTGTGGAGAAGGACAAAACTTTGAAGTGTCTTGAACTGATGAAAAATTTGGGCTGGATGGAAGTTTCTTCTGATTTAAGCAGCATCGACTTTGGAACATGTGTACCTGAAAGCCCTGTTGGAGTGCTAGATTCTTCATGGGAGAACTCTAAATGTGATGAAAAAACAACTGATGAATTATATCCAAATTCTTCTCCTGAAAGTTCACATGCAAGCAAGAGGCACAAGTCCTTCCATGACGATGAAGCTTTTCTAGTCATGAAATTTTAG 1125 0.3671 MEETDDNSDLSSLMCFENISECLDNYESDVDDESSLSFNNPCLSYNNIGSENLLAFRELINETVLSLVKRESEHLPRDDYLERLRGEDINLKFRDLNLNMNLNLNGIRREAIEWMWKAAACYGFGPCIFSLAVNYVDRFLSVYKFERGHLWSEKLLALACLSIAAKLEEGKKLPKSIDFKLGELVFVFETKGITTMELLILDHLNWEMQSSTPCSFVDYFLSKITSEQQFPSGSSMLNSIDLILKMPKYIDFLEFKPSEIAAATAICVSKELETNGIDEVLTRFAIVEKDKTLKCLELMKNLGWMEVSSDLSSIDFGTCVPESPVGVLDSSWENSKCDEKTTDELYPNSSPESSHASKRHKSFHDDEAFLVMKF* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2128 374 PANTHER CYCLIN-D4-1-LIKE 66 362 - -
Mtr8g2128 374 CDD CYCLIN 108 201 IPR013763 -
Mtr8g2128 374 MobiDBLite consensus disorder prediction 338 362 - -
Mtr8g2128 374 SUPERFAMILY Cyclin-like 51 208 IPR036915 -
Mtr8g2128 374 SMART cyclin_7 113 202 IPR013763 -
Mtr8g2128 374 Gene3D - 105 209 - -
Mtr8g2128 374 PANTHER CYCLINS 66 362 IPR039361 -
Mtr8g2128 374 Gene3D - 210 297 - -
Mtr8g2128 374 Pfam Cyclin, N-terminal domain 102 208 IPR006671 -
Mtr8g2128 374 Pfam Cyclin, C-terminal domain 212 303 IPR004367 -
Mtr8g2128 374 ProSitePatterns Cyclins signature. 108 139 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2128 Mtr-Chr8 31296782 31298778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2128 14 278 Core Cell Cycle Gene Families AT5G65420 41.328 1.04e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2128 K18810 - gmx:100800570 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1336 5 13892048 13894672 Mtr8g2128 8 31296782 31298778 PCT