Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2116 ATGGCCAACAACATTTCTAATATGGTAGAGTTGGTTGAGGCTGAAGAAAGTTTCATACATGCTACACAACTTATCTACGCTATTGCGTTTCCAATGGGACTCCATTCTGCAAGTCAGCTTGGTGTATTTGATGTGTTGCAAAAAGCTGGTAAAGATGCTCAACTCTCTGCCCATGAGATTGCGTCGCGTATTTCTTGCAGCAATCCTGATGCTCCCAAAATGTTGGATCGCATTCTTGCTCTTCTTGCATCACATGATGTGTTAAAGTGTTTGCTCATTCAAGATGAACAAAAGCTTGGATCATTTCATAGACTTTATAGTATGACTCCTGTTGCTAGGTTTTTTGCTCCTAATTCTGATGGTGTTTCATTAGGTCCCTTTTTGGCTTTGATTCAAGATAATGTTTTCTTAGCTAGCTGGTCCGAGCTTAATAATGCAATTCGAGAAGGGGGTACTCCGTTCAACAGAGTTCATGGGAGACATCTCTTTGATTATCCAAGCTTTGACTCAAGGTTTAACCAAGTTTTCAATGTTGCCATGGATAATCATAGCCAAATAGTCATGAGAAAAGTTCTTGAATGTTACAAAGGTTTCAAGGACATAAAAAGGCTTGTGGATGTTGGAGGTGGTCTTGGGGCAAACATTCACTTGATCACTTCCAAATACCCACATATACATGGTATCAATTTCGACTTGCGTCATGTCATTCAACATGCCCCTTCATATTCTGGAGTCGAACACGTTAGTGGAGATATGTTTGAAAGTGTGCCTAGAGGAGATGCCATCTTTTTGAAGTGGATACTCCATGATTGGAGTGACGAGCATTGCTTAAAGCTGTTGAAGAACTGTTATGATGCTCTCCCTGACGAGGGAAGGGTGATTATTTTAGAGGCAGTTTGTCCTATTATACCTGCAAATAGTTTCGCTGCCAAGTCTACCTCGCAATTGGATGTAACAATGATGACTCTAATCCCAGGAGCAAAAGAGCGAAATAGACAAGAATTCATGGATTTGGCTACCAATGCTGGATTTAGTGGCATCAAATATGTATGCTGTGTCTGTAACTTCTACGTTATGGAGTTCTTTAAGTAA 1092 0.4038 MANNISNMVELVEAEESFIHATQLIYAIAFPMGLHSASQLGVFDVLQKAGKDAQLSAHEIASRISCSNPDAPKMLDRILALLASHDVLKCLLIQDEQKLGSFHRLYSMTPVARFFAPNSDGVSLGPFLALIQDNVFLASWSELNNAIREGGTPFNRVHGRHLFDYPSFDSRFNQVFNVAMDNHSQIVMRKVLECYKGFKDIKRLVDVGGGLGANIHLITSKYPHIHGINFDLRHVIQHAPSYSGVEHVSGDMFESVPRGDAIFLKWILHDWSDEHCLKLLKNCYDALPDEGRVIILEAVCPIIPANSFAAKSTSQLDVTMMTLIPGAKERNRQEFMDLATNAGFSGIKYVCCVCNFYVMEFFK* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2116 363 Pfam Dimerisation domain 32 83 IPR012967 GO:0046983
Mtr8g2116 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 361 IPR029063 -
Mtr8g2116 363 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 13 363 - -
Mtr8g2116 363 Gene3D - 3 115 IPR036388 -
Mtr8g2116 363 Gene3D Vaccinia Virus protein VP39 117 363 IPR029063 -
Mtr8g2116 363 PANTHER O-METHYLTRANSFERASE 13 363 IPR016461 GO:0008168
Mtr8g2116 363 Pfam O-methyltransferase domain 140 345 IPR001077 GO:0008171
Mtr8g2116 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 363 IPR016461 GO:0008168
Mtr8g2116 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Mtr8g2116 363 CDD AdoMet_MTases 203 295 - -
Mtr8g2116 363 SUPERFAMILY "Winged helix" DNA-binding domain 13 118 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2116 Mtr-Chr8 31183641 31188015 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2116 12 363 Monolignol Biosynthesis Gene Families AT5G54160 48.305 6.76e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2116 K13066 - gmx:100803633 502.286