Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2115 ATGGCCAACCTTTTTAATGTGAAAGAAGAACATGAATTAGAAGATGAAGAAAGTTTCTTATATGCTATACAGCTTTGCAACTCTATGGTGCTACCAATGGTACTCCATTCTGCAAGTCAGCTTGGTGTTTTTGATGTGTTGCAAAAAGCTGGTAAAGGTGCTCAACTCTCTGCCGATGAGATTGCGTCGCGTATTTCTTGCAGCAATCCTGATGCTCCCAAAATGTTGGATCGCATTCTTGTTCTTCTTGCATCACATGATGTGTTAAAGTGTTTGATCATTCAAGATGAACAAAAGCTTGGAACATTTCATAGACTTTATAGTATGACTCCTGTTGCTAGGTTTTTTGCTCCTAATTCTGATGGTGTTTCATTAGGACCTTTGTTGGCTTTGGGTCAAGATAAGGTTTTCTTAGCTAGCTGGTCCCAGCTCAATAATGCAATTCGAGAAGGGGGTATTCCATTCAACATGGTTCATGGCACACATGCCTTTGATTATCCTAGTTTTGACTCAAGGTTCAATCAAGTTTTCAATACAGCGATGATCAACCATACCAAGATAGTTATGAAGAAGGTTCTCGAGAGTTACAATGGTTTCAAAGACATAAAAAGGCTTGTTGATGTTGGAGGTGGTCTTGGAGTCAACATTAACTTGGTCACTTCTAAACACCCTCATATCCAGGGTATCAATTTTGACTTACCTCATGTCATTCAACATGCCCCTTCTTATCCTGGAGTCGAACACATCGGAGGAGATATGTTTAAAAGTGTACCAAAAGCAGATGCCATCTTTATGAAGTGGATACTACATGATTGGAGCGACGATAATTGCTTAAAGCTTTTGAAGAATTGTTACGATGCTATTCCTAATGATGGAAAGGTGATTGTTTTGGAGGCATTTATTCCTATTATACCTGATAATGATTATGCTTCAAGGTCTACCTCCCAATTAGATGTTCTGATGATGACTATGAACCCAGGAGGAAAAGAGAGAACTAAGCAAGAATTCATGGATTTGGCAACTAAAGTTGGATTTAGTGGCATCAGATATGAATGTTGTGTCTGTAATTTTTGGGTTATGGAGTTCTTTAAGTAA 1095 0.3854 MANLFNVKEEHELEDEESFLYAIQLCNSMVLPMVLHSASQLGVFDVLQKAGKGAQLSADEIASRISCSNPDAPKMLDRILVLLASHDVLKCLIIQDEQKLGTFHRLYSMTPVARFFAPNSDGVSLGPLLALGQDKVFLASWSQLNNAIREGGIPFNMVHGTHAFDYPSFDSRFNQVFNTAMINHTKIVMKKVLESYNGFKDIKRLVDVGGGLGVNINLVTSKHPHIQGINFDLPHVIQHAPSYPGVEHIGGDMFKSVPKADAIFMKWILHDWSDDNCLKLLKNCYDAIPNDGKVIVLEAFIPIIPDNDYASRSTSQLDVLMMTMNPGGKERTKQEFMDLATKVGFSGIRYECCVCNFWVMEFFK* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2115 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 364 IPR016461 GO:0008168
Mtr8g2115 364 SUPERFAMILY "Winged helix" DNA-binding domain 14 119 IPR036390 -
Mtr8g2115 364 Gene3D Vaccinia Virus protein VP39 118 364 IPR029063 -
Mtr8g2115 364 Pfam Dimerisation domain 33 84 IPR012967 GO:0046983
Mtr8g2115 364 Pfam O-methyltransferase domain 141 346 IPR001077 GO:0008171
Mtr8g2115 364 PANTHER O-METHYLTRANSFERASE 8 364 IPR016461 GO:0008168
Mtr8g2115 364 PIRSF O-mtase 1 364 IPR016461 GO:0008168
Mtr8g2115 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 362 IPR029063 -
Mtr8g2115 364 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 8 364 - -
Mtr8g2115 364 Gene3D - 5 116 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2115 Mtr-Chr8 31175050 31178965 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2115 12 364 Monolignol Biosynthesis Gene Families AT5G54160 49.296 9.81e-131 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2115 K13066 - mtr:MTR_8g068730 565.074