Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2114 ATGGCAAACCATTCTAATGTGATAGACTTAGGTGTGAATGGAAATGGAGAGAGGAGGTCAGAAAAAAAAGAATTAGAAGATGAAGAAAGTTTCTCATTTGGTATACAGCTTTGCAACTCTATGGTGCTACCAATGGTACTCCATTCTGCAAGTCAGCTTGGTGTATTTGATGTGTTGCAAAAAGCTGGTAAAGGTGCTCAACTCTCTGCCGATGAGATTGCGTCGCGTATTTCTTGCAGCAATCCTGATGCTCCCAAAATGTTGGATCGCATTCTTGCTCTTCTTGCATCACATGATGTGTTAAAGTGTTTGGTCATTCAAGATGAACAAAAGCTTGGATCATTTCGTAGACTTTATAGTATGACTCCTGTTGCTAGGTTTTTTGCTCCTAATTCTGATGGTGTTTCATTAGGACCCTTGCTGGCTTTGTATCAAGATAAGGTTTTCTTGGCTAGCTGGTCTGACCTTAAGAATGCAATTCGAGAAGGGGGTGTCCCATTCAACATGGTTCATGGCACACATGCCTTTGATTATGCAAGTTTTGACTCAAGGTTTAATCAAGTTTTCAATACAGCCATGATCAGTTATACCAAAATAGTTATGAAGAAGGTTCTTGAGAGCTACAATGGTTTCAAGGGCATAAAAAGGCTTGTTGATGTTGGAGGTGGTCTTGGGATCAACATTAACTTGATCACTTCAAAACACCCTCATATACACGGTATCAATTTCGACTTGCCTCATGTCATTCAACATGCCCCCTCGTATCCTGGAGTTGAACACGTTGACGGAGATATGTTTAAAAGTGTTCCTAAAGGAGATGCCATCTTTATGAAGAGCATACTCCATGATTGGAGTGATGAGCTCTGCTTAAAGATTTTGAAGAATTGTTATGATGCTATCCCTAATGATGGGAAGGTGATTGTTTTAGAGGCACAAATTCCCACTGTGCATGAGAATGATTATGCTTCGAAGTCTACCTCTCAATTAGATGTTCTGATGATGACTCAAACCCTAGGAGGAAAAGAGAGAACTAAGCAAGAATTTCTTGATTTGGCAACTAGAGCTGGATTTAGAGGCATCAATTATGAATGTTGTGTTCGTAACAAATGGGTTATGGAGTTCTTTAAGTAA 1131 0.397 MANHSNVIDLGVNGNGERRSEKKELEDEESFSFGIQLCNSMVLPMVLHSASQLGVFDVLQKAGKGAQLSADEIASRISCSNPDAPKMLDRILALLASHDVLKCLVIQDEQKLGSFRRLYSMTPVARFFAPNSDGVSLGPLLALYQDKVFLASWSDLKNAIREGGVPFNMVHGTHAFDYASFDSRFNQVFNTAMISYTKIVMKKVLESYNGFKGIKRLVDVGGGLGININLITSKHPHIHGINFDLPHVIQHAPSYPGVEHVDGDMFKSVPKGDAIFMKSILHDWSDELCLKILKNCYDAIPNDGKVIVLEAQIPTVHENDYASKSTSQLDVLMMTQTLGGKERTKQEFLDLATRAGFRGINYECCVRNKWVMEFFK* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2114 376 Pfam Dimerisation domain 45 96 IPR012967 GO:0046983
Mtr8g2114 376 Gene3D - 13 128 IPR036388 -
Mtr8g2114 376 PANTHER O-METHYLTRANSFERASE 14 376 IPR016461 GO:0008168
Mtr8g2114 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 373 IPR029063 -
Mtr8g2114 376 Pfam O-methyltransferase domain 153 358 IPR001077 GO:0008171
Mtr8g2114 376 SUPERFAMILY "Winged helix" DNA-binding domain 26 131 IPR036390 -
Mtr8g2114 376 PIRSF O-mtase 13 376 IPR016461 GO:0008168
Mtr8g2114 376 Gene3D Vaccinia Virus protein VP39 130 376 IPR029063 -
Mtr8g2114 376 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 14 376 - -
Mtr8g2114 376 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 35 376 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2114 Mtr-Chr8 31154504 31160491 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2114 15 376 Monolignol Biosynthesis Gene Families AT5G54160 47.527 1.87e-123 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2114 K13066 - mtr:MTR_8g068730 548.895