Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2113 ATGGCAAACCATTCTAATGTGAAAGACTTAGGTCATGTGAATGGAAATGGAGAGAGGAAATCCGAAAAACAAGAATTAGAAGATGAAGAAAGTTTCTCATATGCTATACAGCTTGGTAGCTCTATGGTGCTACCGATGGTACTCCATTCTGCAAGTCAGCTTGGTGTATTTGATGTGTTGCAAAAAGCTGGTAAAGGTGCTCAACTCTCTGCCGATGAGATTGCGTCGCGTATTTCTTGCAGCAATCCTGATGCTCCCAAAATGTTGGATCGCATTCTTGCTCTTCTTGCATCACATGATGTGTTAAAGTGTTTGGTCATTGAAGATGAACAAAAGTTTGGATCATTTCATAGACTTTATAGTATGACTCCTGTTGCTAGGTTTTTTGCTCCTAATTCTGATGGTGTTTCATTAGGACCCTTGTTGGCTTTGATTCAAGATAATGTTTTCTTAGCTAGCTGGTCTGAGTTTAATAATGCAATTCGAGAAGGGGGTGTCCCATTCAACATGGTTCATGGCACACATGCCTTTGATTATCCAAGCTTGGATTCAAGGTTCAACAAAGTTTTCAATACAGCGATGATCAATCATACCAAAATAGTTATGAACAAGGTTCTTGAGAGCTACAATGGTTTCGAGGGCATAAAAAGGCTTGTTGATGTTGGAGGTGGTCTTGGGGTTAACATTCAATTGGTTACATCAAAATACCCTAATATACATGGTATCAATTTCGACTTGCCTCATGTCATTCAACATGCCCCTTCTTATCCTGGAGTTGAACACGTTGGTGGCGATATGTTTGAAAGTGTGCCTAAAGGAGATGCCATTCTTATGAAGTGGATACTCCATGATTGGAGTGATGAGCATTGCTTAAAGATTTTGAAGAATTGTTATGATGCTATCCCTAATGATGGAAAGGTGATTGTTTTAGAGGCACATATTCCCATTGTGCCTGAGAATAGTTATGCTTCAAAGTCTACCTCTCAATTGGATGTTCTGATGATGACTCAAAGTCCAGGAGGAAAAGAACGAACTAAGCAAGAGTTCATTGATTTGGCAACTAGAGTTGGATTTATTGGCATAAGATGTGAATGTTGTGTTCGTAACTTTTGGGTTATGGAGTTCTTTAAGTGA 1134 0.3924 MANHSNVKDLGHVNGNGERKSEKQELEDEESFSYAIQLGSSMVLPMVLHSASQLGVFDVLQKAGKGAQLSADEIASRISCSNPDAPKMLDRILALLASHDVLKCLVIEDEQKFGSFHRLYSMTPVARFFAPNSDGVSLGPLLALIQDNVFLASWSEFNNAIREGGVPFNMVHGTHAFDYPSLDSRFNKVFNTAMINHTKIVMNKVLESYNGFEGIKRLVDVGGGLGVNIQLVTSKYPNIHGINFDLPHVIQHAPSYPGVEHVGGDMFESVPKGDAILMKWILHDWSDEHCLKILKNCYDAIPNDGKVIVLEAHIPIVPENSYASKSTSQLDVLMMTQSPGGKERTKQEFIDLATRVGFIGIRCECCVRNFWVMEFFK* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2113 377 Pfam O-methyltransferase domain 154 358 IPR001077 GO:0008171
Mtr8g2113 377 Gene3D - 14 129 IPR036388 -
Mtr8g2113 377 PANTHER O-METHYLTRANSFERASE 15 377 IPR016461 GO:0008168
Mtr8g2113 377 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 36 377 IPR016461 GO:0008168
Mtr8g2113 377 PIRSF O-mtase 13 377 IPR016461 GO:0008168
Mtr8g2113 377 MobiDBLite consensus disorder prediction 1 26 - -
Mtr8g2113 377 Gene3D Vaccinia Virus protein VP39 131 377 IPR029063 -
Mtr8g2113 377 SUPERFAMILY "Winged helix" DNA-binding domain 27 132 IPR036390 -
Mtr8g2113 377 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 375 IPR029063 -
Mtr8g2113 377 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 15 377 - -
Mtr8g2113 377 Pfam Dimerisation domain 46 97 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2113 Mtr-Chr8 31119471 31123247 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2113 16 377 Monolignol Biosynthesis Gene Families AT5G54160 49.176 1.33e-131 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2113 K13066 - mtr:MTR_8g068730 587.03