Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr8g2112 | ATGGCAAACCATTCTAATGTGAAAGACTTAGGTCATGTGAATGGAAATGGAGAGAGAAAATCAGAAAAACATGAATTAGAAGATGAAGAAAGTTTCGCATATTATGCTATACAGCTTGGTAGCTCTATGGTGCTACCGATGGTACTCCATTCTGATAGCGCACTTGGTGTATTTGATGTGTTGCAAAAAACTGGTAAAGGTGCTCAACTCTCTGCCGATGAGATTGTGTCGCGTATTTCTTGCAGCAATCCTGATGCTCCCAAAATGTTGGATCGCATTCTTGCTGTTCTTGCCTCACATGATGTGTTAAAGTGTTTGGTCATTCAAGATGAACAAAAGCTTGGAACATTTCATAGATTTTATAGTATGACTCCTGTTGCTAGGTTTTTTGCTCCTAATTCTGATGGTGTTTCATTAGGACCCTTGTTGGCTTTGATTCAAGATAATGTTTTCTTAGCTAGCTGGTTAGTCTGAGCTTATGCAATTCGAGAAGGGGGTGTCCCATTCAACATGGTTCATGGCACACATGTTTTTCATTATCTAAGCTTGGACTCAAGGTTCAACAAAGTTTTCAATACAGCGATGATCAATCATACTAAAATAGTTATGAACAAGGTTCTTGAGAGATACAATGGTTTCGAGGGCATAAGGAGGCTTGTTGATGTTGGAGGTGGTCTTGGGGTTAACATTCACTTGATCACATCAAAATACCCTAATATACATGGAGTTGAACACGTTGGTGGCGATATGTTTGAAAGTGTGCCTAAAGAAGATGTCATTTTAATGAAGTATGACACAAGCAGACAATATGCATTGAATGCTGGGAATTGGGATGAAGTGAAAAGTGTGACGATCAATAGCGACACAGAAATTGAAGAATGA | 882 | 0.39 | MANHSNVKDLGHVNGNGERKSEKHELEDEESFAYYAIQLGSSMVLPMVLHSDSALGVFDVLQKTGKGAQLSADEIVSRISCSNPDAPKMLDRILAVLASHDVLKCLVIQDEQKLGTFHRFYSMTPVARFFAPNSDGVSLGPLLALIQDNVFLASWLV*AYAIREGGVPFNMVHGTHVFHYLSLDSRFNKVFNTAMINHTKIVMNKVLERYNGFEGIRRLVDVGGGLGVNIHLITSKYPNIHGVEHVGGDMFESVPKEDVILMKYDTSRQYALNAGNWDEVKSVTINSDTEIEE* | 294 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr8g2112 | 292 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 37 | 292 | IPR016461 | GO:0008168 | |
| Mtr8g2112 | 292 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 138 | 262 | IPR029063 | - | |
| Mtr8g2112 | 292 | PANTHER | O-METHYLTRANSFERASE | 15 | 263 | IPR016461 | GO:0008168 | |
| Mtr8g2112 | 292 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Mtr8g2112 | 292 | Gene3D | Vaccinia Virus protein VP39 | 132 | 284 | IPR029063 | - | |
| Mtr8g2112 | 292 | PANTHER | CAFFEIC ACID O-METHYLTRANSFERASE | 15 | 263 | - | - | |
| Mtr8g2112 | 292 | Gene3D | - | 14 | 130 | IPR036388 | - | |
| Mtr8g2112 | 292 | SUPERFAMILY | "Winged helix" DNA-binding domain | 28 | 133 | IPR036390 | - | |
| Mtr8g2112 | 292 | Pfam | Dimerisation domain | 47 | 98 | IPR012967 | GO:0046983 | |
| Mtr8g2112 | 292 | Pfam | O-methyltransferase domain | 159 | 240 | IPR001077 | GO:0008171 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr8g2112 | Mtr-Chr8 | 31100808 | 31109274 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr8g2112 | 25 | 263 | Monolignol Biosynthesis Gene Families | AT5G54160 | 44.015 | 8.34e-68 | 213 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr8g2112 | K13066 | - | mtr:MTR_8g068600 | 442.965 |