Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2107 ATGAATATGATCTGTTCAACATGCTTTCATGTTTTCATTCTCTTTGCTGCTACACTAACATTACTATGTCTCCAACATAAGAATACTGCTAGTGCCTTAGGAAATGACACAGACCAATTATCATTACTTAGATTCAAAGAAACAATAGTAGATGACCCTTTTGATATCTTGAAATCTTGGAATACTTCAACTTCATTTTGCAACTGGCATGGAGTCAAATGCAGCCTTAAGCATCAAAGGGTTACTTCTTTGAACCTACAAGGGTATGGCTTACTTGGATTGATACCTCCTGAAATTGGAAACCTTACCTTTTTAAGGTATGTTAACCTTCAAAACAACAGTTTCTATGGTGAAATACCACAAGAAATAGGTCATTTGTTTAGGCTAAAGGAGCTTTATCTGACCAATAACACATTCAAGGGTCAAATTCCAACCAACTTGTCTAGTTGCTTTAGACTTAAGAGCTTGAGTTTAACAGGAAACAAACTAGTTGGAAAGATACCAAAGGAGCTTGGTTATCTTACGAAGCTAGAATTTCTATCTATTGGTATGAACAATTTGAGTGGTGAAATCCCTGCATCTATAGGAAATCTTTCATCTCTTAGTGTTCTCATTTTTGGAATCAATAATTTGGAAGGAAATTTACCTGAAGAGATAGGCCATCTGAAAAATTTAACACATATCTCTATTGCATCAAACAAACTATATGGTATGCTTCCTTTTACATTATTTAATATGTCATCTCTCACTTTCTTCTCAGCTGGTGTCAATCAATTTAATGGCTCTTTACCTGCCAACATGTTTCTCACACTCCCTAATCTCCAACAATTTGGTATTGGTATGAATAAGATCTCAGGTCCTATACCAATTTCAATATCGAATGCGACAAATTTGTTGTTATTTAATATCCCTAGGAATAACTTTGTTGGACAAGTTCCAATTGGAATAGGAAATCTCAAAGATATCTGGTCTATTGCTATGGAATATAATCATCTAGGGAGTAATTCATCCAAGGACTTGGATTTCTTAACATCTTTGACAAATTGCACAAATTTACAAGTGTTGGATTTAAATCTAAACAACTTTGGTGGTTATTTACCAAACTCTGTAGCTAACTTTTCACGTCAACTGAGTCAGTTTTATATTGGTGGAAATCAGATTACTGGAACTATTCCTCCCGGAGTTGGAAATCTCGTCAACTTGATTGGCTTTGACTTGGAGTTTAACCTTCTCTCAGGTTCCATTCCATCGTCTTTTGGAAATTTTGATAAGATACAATCATTGACATTGAATGTAAACAAACTTTCAGGAAAGATTCCATCATCACTTGGCAACCTTAGTCAGTTATTTCAACTCGACTTATCAAATAATATGCTAGAAGGAAACATTCCTCCTAGTATTGGAAATTGCCAAATGCTACAATACTTGGACCTTTCCAATAACCACCTCAGTGGAAACATTCCTTGGCAAGTCATTGGTCTTCCCTCTTTGTCAGTTTTACTCAACTTATCTCATAATTCATTCCATGGAAGCCTACCCTTTGAAATTGGCAACCTGAAAAGCATCAATAAGCTGGATGTTTCTAAAAATTCTCTATCTGGTGAAATTCCTTCAACAATTGGACAATGCATAAGTTTGGAATACCTGAACTTACAAGGGAACATTTTCCAGGGAGTCATGCCTTCATCTTTGGCTTCATTGAAAGGCCTTCGATATTTAGATTTGTCACAAAACAACTTGTCAGGTTCCATTCCACAAGGTCTAGAAAGTATTCCTGTTCTGCAGTACTTGAATATTTCTTTTAACATGTTGAATGGTGAAGTACCGACTGAAGGTGTGTTTAGAAATGAAAGTGAGATATTTGTGAAAAACAATAGTGACCTTTGTGGTGGTATCACAGGTTTAGATCTACAACCATGTGTAGTCGAAGATAAGACACACAAAAACCAAAAGGTCTTGAAGATAATAGTAATAATAATTTGCGTTGTTTTTTTCCTTCTTTTGTTATCTTTCACTATTGCAGTCTTCTGGAAGAAGGAAAAAACAAACCGGAGAGCTTCCAATTTTTCATCTACAATAGATCACCTTGCAAAGGTTACATACAAAACACTTTATCAAGCAACAAATGGATTCTCTTCCAGCAACTTGATAGGATCTGGTGGTTTTGGATTTGTATATAAAGGAATTCTTGAGTCAGAAGAAAGAGTTGTTGCTATAAAGGTCTTGAACCTTCAAGTCAGGGGAGCGCACAAGAGTTTCATCGCTGAATGCAATGCACTCAAAAGTATCCGTCATAGGAATCTTGTCAAGATTTTAACATGTTGTTCAAGTATGGATTACAATGGTAATGAATTCAAAGCTTTAGTTTTTGAGTACATGGAAAATGGAAGTTTAGATAAATGGCTGCATCCTGATTTCAATATCGGAGATGAACCAAGTTTGAACCTTCTCCAAAGATTAAATATTCTCACAGATGTTGCTTCTGCAATGCACTATCTACACTTTGAATCTGAGCATCCAATCATTCATTGTGATTTAAAGCCAAGCAATATTCTTCTTCATAATGACATGGTTGCTCATGTGAGTGATTTTGGACAAGCAAGACTTCTTTGTGTCATCAATGACATCTCTGATCTACATACAACTACAATTGGATTCAACGGAACAGTTGGATATGCTCCTCCAGAATACGGAGTGGGATGTCAAGTTTCAGTTCAGGGTGATGTGTATAGCTTTGGAATCCTTTTACTCGAAATATTAACAGGAAGAAAACCGACAGATGAAATGTTTAGAAATGGCATGAATCTTCATTCTTTTGTCAAGGTTTCACTGCCAGACAAACTGCTAGACATAGTAGACTCAACTCTACTCCCAAGAGAATTCGAACAAGCAACTGTATCAACAACAGCAGAAGAAAAGAATAACAGTGATCAGCAACAGTGCTTACTTGAACTCTTTTATATTGGACTAGCTTGTTCAGTAGAATCACCGAGAGCGAGAATAAATATGAAGACTGTCACCAGGGAGCTAGATGTAATTAAAATTGCTCTTTCTAGGAAGTAA 3063 0.3591 MNMICSTCFHVFILFAATLTLLCLQHKNTASALGNDTDQLSLLRFKETIVDDPFDILKSWNTSTSFCNWHGVKCSLKHQRVTSLNLQGYGLLGLIPPEIGNLTFLRYVNLQNNSFYGEIPQEIGHLFRLKELYLTNNTFKGQIPTNLSSCFRLKSLSLTGNKLVGKIPKELGYLTKLEFLSIGMNNLSGEIPASIGNLSSLSVLIFGINNLEGNLPEEIGHLKNLTHISIASNKLYGMLPFTLFNMSSLTFFSAGVNQFNGSLPANMFLTLPNLQQFGIGMNKISGPIPISISNATNLLLFNIPRNNFVGQVPIGIGNLKDIWSIAMEYNHLGSNSSKDLDFLTSLTNCTNLQVLDLNLNNFGGYLPNSVANFSRQLSQFYIGGNQITGTIPPGVGNLVNLIGFDLEFNLLSGSIPSSFGNFDKIQSLTLNVNKLSGKIPSSLGNLSQLFQLDLSNNMLEGNIPPSIGNCQMLQYLDLSNNHLSGNIPWQVIGLPSLSVLLNLSHNSFHGSLPFEIGNLKSINKLDVSKNSLSGEIPSTIGQCISLEYLNLQGNIFQGVMPSSLASLKGLRYLDLSQNNLSGSIPQGLESIPVLQYLNISFNMLNGEVPTEGVFRNESEIFVKNNSDLCGGITGLDLQPCVVEDKTHKNQKVLKIIVIIICVVFFLLLLSFTIAVFWKKEKTNRRASNFSSTIDHLAKVTYKTLYQATNGFSSSNLIGSGGFGFVYKGILESEERVVAIKVLNLQVRGAHKSFIAECNALKSIRHRNLVKILTCCSSMDYNGNEFKALVFEYMENGSLDKWLHPDFNIGDEPSLNLLQRLNILTDVASAMHYLHFESEHPIIHCDLKPSNILLHNDMVAHVSDFGQARLLCVINDISDLHTTTIGFNGTVGYAPPEYGVGCQVSVQGDVYSFGILLLEILTGRKPTDEMFRNGMNLHSFVKVSLPDKLLDIVDSTLLPREFEQATVSTTAEEKNNSDQQQCLLELFYIGLACSVESPRARINMKTVTRELDVIKIALSRK* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2107 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Mtr8g2107 1020 PANTHER LRR RECEPTOR-LIKE KINASE 23 1015 - -
Mtr8g2107 1020 SUPERFAMILY L domain-like 37 332 - -
Mtr8g2107 1020 SUPERFAMILY Protein kinase-like (PK-like) 687 1010 IPR011009 -
Mtr8g2107 1020 PRINTS Leucine-rich repeat signature 473 486 - -
Mtr8g2107 1020 PRINTS Leucine-rich repeat signature 567 580 - -
Mtr8g2107 1020 Pfam Protein tyrosine and serine/threonine kinase 714 1009 IPR001245 GO:0004672|GO:0006468
Mtr8g2107 1020 ProSitePatterns Protein kinases ATP-binding region signature. 717 740 IPR017441 GO:0005524
Mtr8g2107 1020 Gene3D Transferase(Phosphotransferase) domain 1 793 1019 - -
Mtr8g2107 1020 Gene3D Phosphorylase Kinase; domain 1 671 792 - -
Mtr8g2107 1020 ProSiteProfiles Protein kinase domain profile. 711 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2107 1020 SUPERFAMILY L domain-like 376 630 - -
Mtr8g2107 1020 Gene3D Ribonuclease Inhibitor 91 334 IPR032675 -
Mtr8g2107 1020 Gene3D Ribonuclease Inhibitor 32 90 IPR032675 -
Mtr8g2107 1020 SMART serkin_6 711 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2107 1020 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Mtr8g2107 1020 Pfam Leucine rich repeat 545 604 IPR001611 GO:0005515
Mtr8g2107 1020 PANTHER OS04G0122200 PROTEIN 23 1015 - -
Mtr8g2107 1020 SMART LRR_typ_2 126 150 IPR003591 -
Mtr8g2107 1020 SMART LRR_typ_2 567 591 IPR003591 -
Mtr8g2107 1020 SMART LRR_typ_2 174 198 IPR003591 -
Mtr8g2107 1020 SMART LRR_typ_2 222 246 IPR003591 -
Mtr8g2107 1020 SMART LRR_typ_2 494 519 IPR003591 -
Mtr8g2107 1020 SMART LRR_typ_2 398 421 IPR003591 -
Mtr8g2107 1020 SMART LRR_typ_2 446 470 IPR003591 -
Mtr8g2107 1020 Gene3D Ribonuclease Inhibitor 335 640 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2107 Mtr-Chr8 31063718 31067485 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2107 35 1014 Receptor kinase-like Gene Family AT3G47570 45.711 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr8g2107 PK_Tyr_Ser-Thr 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2107 - - qsu:112010890 1110.52