Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2106 ATGGATACAACTCAAATTGAAAAAATATATGTTGCAGTTGGCTATGATGTGTTAGATGGATTTCAAACATTGGATTGGGCTCTCAAGAAATGGAATTCTCATCCAAATATTTCTATAATCATTTTACATGTCAAATACAACTCTTCCAAAGATCATGTTTATACCCTCCTTGGAAAACTCCCTGCAAAAGGTGCATGTGAAGAGACACTAGAACGTATAAGGAAATATGAGGAAACCATAATCAACAAGCTACTCTCCAAGTATATAGCTTTATGTGACAAAATTCCAGCTGAAACATTTGAGGTTGAGAAATTTGATGAACCAATGCAGAATATCACTATAGACTTGATCTTTGGTCTTGGAATAACGAAATTGGTCATCGGATTTTCATTCATGAGACATTCCTTGAAATCTAAAGATGCCATGAATGGATTATTCTATGTTCATCAGCACAAGCCTGATTTCTGTGAATTATTCATTATCTGTGGAGGGAAACAAGTTTCACCAAGAGTGAAAAATGATGAGATAACCATGGAGGATGATAGTGGGGTCAAGGTTGCCAAAATGAGAGATAAGACAAGTTTTAAATATTGGATAGAAAGAATGTTTTGTGATAAAACCATTGATTCCAACCAAACAAGTTCTAGCAGATCACCAACTACCTCAACAAGTTTGGAGTCTCATCTTGACCAAAATCAGTGGGAACTTTATATGCAAGAAATTGAGAATTATTTACAAGAGTTAATGTCTTTACATTTGGATGAAGGAAGTTTTGGACAAGACAATGATGATTCCTTCTTAAGTCCAATTGAGCCATATGTCCAACAACTTAAAAATTCCAATAATAAGAGTGCTGAAGAAAAATTGGAGATTGTCATTGATAAACTGAATGAAGCTTATAATACAATCCAAGTGGAAAGAAAAGAAGAAAAGGAGAATTTGGAGAGACATGCAAAAGCTGAATGGGCGATTTATATATGCAGTCGTCGGGAAGAAGAACTTGAATATCTAAAAAGTGAAGAAGTGACAAAAAGGGAAGAGCTAAAGAAGGAACTTAATGTAGAAAAAGATCAAATTTATTATATTAGAACGTATGTTGAAGAGAGCAAACAAAGGCTTAGCTCACTGCAAGATCTACAACTAGACCTAAAAAATAAACTTAATGTTTCCACATTGGAAGTTTCAGAATGTGAAACCAAATTAGAGAAAGTAATGAATGAAAGGACAAATATGTTAATGGAGATAGAGGAGTTAAGTAGACAAAGAGATGTGTTTAACAAAAGGATTAAATTTTTCAAAGGAAAAGATGCCACAAAAATGTGTAATAAGATAATAGATAATGGTTGTAGTTTAAGAGAGTACACAAAGGAAGAGATCATAATGGCAAGTCACAATTTTTCAGAACACTTTAGGTTGAAATGTGGTGGTGATTGGAGTAATGTTTATAAAGGACACATTGATCATTATTCCAATGTTGCAATCAAGATGCTTCATTCTAATCTTGCCTTGTCCCAACATGATTTCCAAGCTAAGTTGAGGTCACTTGGTAGTATTCGACATCCTCATCTGGTTGGTATACTTGGATTCTGCTCTGAGCCCAAATGCTTAGTATTGGAATACATGCACAATGGCAGTTTGGAAGAAAACCTACCTTGCAAGACAAGAAAGAAGTTCATAAGCTGGCAAGATTGCATAAGGATAGCCATAGAAGTTTGTTCTGGGCTGGGCTTTCTAAGCTCATTTCAGCCCAGGCCCATAACTCATTGTCATGTTTCTCCATCCAACATCCTCCTAGACAACAATCTTGTTGCAAAGATCAAACTGTTTGGTCTTCATGAGTGCAATAATGAATGTAATGTTGGATCAGATGTGAAGGCAATAGGGGTTTTGTTGTTATATTTATTGACTGGAAGAGGAAATTGGGTGCCCATGGATATTGAGGATTTTTTTGATGAGATTGGTGAAGAATGGCCATTGGATGTAGCAAGAGAACTATTGAGCTTAGCAATGAGATGCATGTCCATAAATTTTGAGTCCAATGAAGAAATGAGTATAACAAGTGTCATGGGTGAACTCAATGAGATCAAAAGAAAGGGTTGTGACTCCAATAAAATGCCTAATGTTTTTCTATGTCCAATCCTTCAAAAGGTAATGATAAATCCACACATAGCAGCAGATGGATTTTCTTATGAGCTAGAAGCAATAGAACAGTGGTTGCAATCTGGGAATGAAATATCACCCAAAAGCTTGAGGCTGAAGAACACATTACTCTTCCCTAATCATAACCTTCGTTCCCTAATTCAGTTCTGGCAAAGCAAGAAATCAGAAGTTGTAAAATAG 2340 0.3551 MDTTQIEKIYVAVGYDVLDGFQTLDWALKKWNSHPNISIIILHVKYNSSKDHVYTLLGKLPAKGACEETLERIRKYEETIINKLLSKYIALCDKIPAETFEVEKFDEPMQNITIDLIFGLGITKLVIGFSFMRHSLKSKDAMNGLFYVHQHKPDFCELFIICGGKQVSPRVKNDEITMEDDSGVKVAKMRDKTSFKYWIERMFCDKTIDSNQTSSSRSPTTSTSLESHLDQNQWELYMQEIENYLQELMSLHLDEGSFGQDNDDSFLSPIEPYVQQLKNSNNKSAEEKLEIVIDKLNEAYNTIQVERKEEKENLERHAKAEWAIYICSRREEELEYLKSEEVTKREELKKELNVEKDQIYYIRTYVEESKQRLSSLQDLQLDLKNKLNVSTLEVSECETKLEKVMNERTNMLMEIEELSRQRDVFNKRIKFFKGKDATKMCNKIIDNGCSLREYTKEEIIMASHNFSEHFRLKCGGDWSNVYKGHIDHYSNVAIKMLHSNLALSQHDFQAKLRSLGSIRHPHLVGILGFCSEPKCLVLEYMHNGSLEENLPCKTRKKFISWQDCIRIAIEVCSGLGFLSSFQPRPITHCHVSPSNILLDNNLVAKIKLFGLHECNNECNVGSDVKAIGVLLLYLLTGRGNWVPMDIEDFFDEIGEEWPLDVARELLSLAMRCMSINFESNEEMSITSVMGELNEIKRKGCDSNKMPNVFLCPILQKVMINPHIAADGFSYELEAIEQWLQSGNEISPKSLRLKNTLLFPNHNLRSLIQFWQSKKSEVVK* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2106 779 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 704 779 IPR013083 -
Mtr8g2106 779 SUPERFAMILY RING/U-box 704 775 - -
Mtr8g2106 779 ProSiteProfiles U-box domain profile. 704 777 IPR003613 GO:0004842|GO:0016567
Mtr8g2106 779 Gene3D Phosphorylase Kinase; domain 1 437 540 - -
Mtr8g2106 779 Coils Coil 338 358 - -
Mtr8g2106 779 Coils Coil 366 386 - -
Mtr8g2106 779 Pfam U-box domain 706 775 IPR003613 GO:0004842|GO:0016567
Mtr8g2106 779 CDD RING-Ubox_WDSUB1_like 709 747 - -
Mtr8g2106 779 Gene3D Transferase(Phosphotransferase) domain 1 548 694 - -
Mtr8g2106 779 PANTHER OS02G0152300 PROTEIN 4 774 - -
Mtr8g2106 779 SMART Ubox_2 708 770 IPR003613 GO:0004842|GO:0016567
Mtr8g2106 779 Coils Coil 401 421 - -
Mtr8g2106 779 Coils Coil 282 320 - -
Mtr8g2106 779 ProSiteProfiles Protein kinase domain profile. 467 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2106 779 Pfam Protein tyrosine and serine/threonine kinase 476 613 IPR001245 GO:0004672|GO:0006468
Mtr8g2106 779 PANTHER U-BOX KINASE FAMILY PROTEIN 4 774 - -
Mtr8g2106 779 SUPERFAMILY Protein kinase-like (PK-like) 459 678 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2106 Mtr-Chr8 31057870 31061626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2106 4 775 U-box Gene Family AT5G65500 43.403 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mtr8g2106 PK_Tyr_Ser-Thr 9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2106 - - gmx:100795815 984.171