Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2102 ATGGAGAGATTAAGGAACAAAAGGGATCAAGAAAAGAAAGAAAAGAGATGGAGAATGGTCGATATGATAACGGGTAATAACAATAATCCAAAGAAAGAGTTTGGTTTTGCAAATGAAAACAACAATGATTCACCAACAGCATCACCAAGAGGTGTATTTGAGGTACCTATTTCGGATTCCGACAGCACGGGGAGCAGCAACTACAGCAATGGAGGTAAACCATCATCACCAGGAGGAGGAGATGGAGGGCACCAATGGAAGGCTATGATTGATGCATTGAGGTTTAAGTCTGTGAGGAGATTTTCTAGCATTCCTTTGCTTGCTGCTAGTTATGAAATTTCTAGGAAGAATTTGAGGAACAAGTTGGCTCGTAAAAGAACAGCTAACGATGAAGATGAGAATATTTTTGATGCTGCTTTTGATCTTGATGGTATTACAAAGCCTTCTTGGAGAAACTTTAGTTATGAAGATCTTGTTGCTGCAACCGACAATTTCAATCCTGAGAACATGATTGGAAAAGGTGGTCATGCAGAAGTGTACAAAGGACGCTTACCTGATGGAATGGTTGTAGCAGTAAAGAGGCTAATGAACAATGAGAAGGAAGCTGGAGACAGAGCTGCTGGTGATTTCTTGTCGGAGCTTGGGATTATTGCTCACATTAACCACCCAAATGCAACGCGTCTCATCGGTTTTGGAATTGATCGTGGCCTCTACTTTGTTCTTCAATTCGCCCCACATGGAAGCCTTTCCTCTTTGCTCTTTGGTTCTGAATGTTTGGCGTGGAATATAAGGTTCAAGGTAGCAGTTGGGGTAGCCAAAGGTTTGCAATATCTCCATCAAGATTGTCCAAGAAGAATCATTCACAGAGACATCAAAGCCTCAAACATATTACTCAACAATGATGATGAAGCAGAGATTTCAGATTTTGGATTAGCTAAGTGGCTTCCGGATAAATGGGCGCACCATGTTGTATTCCCAATAGAAGGCACATTCGGGTATTTGGCTCCAGAGTATTTCATGCATGGACTTGTGGATGAGAAGACTGATGTTTTTGCATTTGGGGTATTGTTACTTGAACTCTTGACAGGTCGTCGTGCGGTTGATTCAAATAGCAAGCAAAGTCTTGTGATTTGGGCTAAACCACTATTGGACGCAAAGCAAGTGAAAGAAATAGCAGACCCAAGATTAGGAGAGCAATATGATCCAATTGAAATGAAGCTAGTCATGGCAACAGCTTCCAGATGTATCCACCACATGTCCTCAAAAAGACCATTCATGGACCAGGTTTTGCTACTACTAAAGGGAGAAGAGGTAGCAATGGACCTCACTCAAAAAACAATAGCTCCAAGGTCACTCTTGTTAGATGCTTGTGATTTAGAAGACTATACTTGTTCTAATTATTTGAATGATCTCAATCGCCACAAGCAATTAATCATGGAGATATGA 1446 0.4115 MERLRNKRDQEKKEKRWRMVDMITGNNNNPKKEFGFANENNNDSPTASPRGVFEVPISDSDSTGSSNYSNGGKPSSPGGGDGGHQWKAMIDALRFKSVRRFSSIPLLAASYEISRKNLRNKLARKRTANDEDENIFDAAFDLDGITKPSWRNFSYEDLVAATDNFNPENMIGKGGHAEVYKGRLPDGMVVAVKRLMNNEKEAGDRAAGDFLSELGIIAHINHPNATRLIGFGIDRGLYFVLQFAPHGSLSSLLFGSECLAWNIRFKVAVGVAKGLQYLHQDCPRRIIHRDIKASNILLNNDDEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGLVDEKTDVFAFGVLLLELLTGRRAVDSNSKQSLVIWAKPLLDAKQVKEIADPRLGEQYDPIEMKLVMATASRCIHHMSSKRPFMDQVLLLLKGEEVAMDLTQKTIAPRSLLLDACDLEDYTCSNYLNDLNRHKQLIMEI* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2102 481 PANTHER OS08G0249100 PROTEIN 1 480 - -
Mtr8g2102 481 Gene3D Transferase(Phosphotransferase) domain 1 245 448 - -
Mtr8g2102 481 SUPERFAMILY Protein kinase-like (PK-like) 149 438 IPR011009 -
Mtr8g2102 481 SMART serkin_6 165 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2102 481 MobiDBLite consensus disorder prediction 1 85 - -
Mtr8g2102 481 Pfam Protein kinase domain 168 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2102 481 MobiDBLite consensus disorder prediction 1 20 - -
Mtr8g2102 481 Coils Coil 115 135 - -
Mtr8g2102 481 ProSiteProfiles Protein kinase domain profile. 165 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2102 481 MobiDBLite consensus disorder prediction 22 48 - -
Mtr8g2102 481 ProSitePatterns Protein kinases ATP-binding region signature. 171 193 IPR017441 GO:0005524
Mtr8g2102 481 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 1 480 - -
Mtr8g2102 481 MobiDBLite consensus disorder prediction 58 74 - -
Mtr8g2102 481 Gene3D Phosphorylase Kinase; domain 1 140 241 - -
Mtr8g2102 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2102 Mtr-Chr8 30997799 31001655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2102 149 456 Trihelix Transcription Factor Family AT5G38560 41.693 1.04e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mtr8g2102 Pkinase 1.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2102 - - gmx:100794225 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1313 5 13580112 13585727 Mtr8g2102 8 30997799 31001655 PCT