Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2092 ATGGCAATTTCACCAGAGTTGGAGCATCCCAGGAAGGCTTTTGGATTGGCAGCTAAGGACTCATCTGGAGTTCTCTCTCCCTTCATCTTCTCAAGAAGGGAAACTGGAGAGAAAGATGTAAGATTCAAAGTGCTATTTTGTGGTATATGTCACTCAGATCTTCACATGTTGAAGAATGAATGGGGTAATTCTGTTTACCCCGTAGTGCCTGGGCACGAGATTGTAGGTGAAGTAACAGAGGTGGGAGACAAGGTACAAAAATTCAAAGTTGGAGACAAGGTAGGTGTTGGGTGCATGGTTCAATCCTGCCACTCATGCCAAAATTGCAACGAAAGTCTCGAAAATTACTGTCCAAAAGTGATTCTCACATACGGTTCCAAGAATCTTGATGGCACCATCACATATGGAGGCTACTCCGACACAATGGTCACCGACGAAAGCTTTGTGATCAGCATTCCAAATAGCCTACCTCTTGATGCTGCAGCTCCTCTCCTCTGCGCCGGGATCACGGTGTATAGCCCTTTGAAATATTTTGGACTTGATAAACCTAACTTGCAATTAGGTGTGGTTGGTCTTGGTGGACTTGGTCATATGGCTGTGAAATTTGCCAAAGCTTTTGGTGCTAAGGTAACAGTGATTAGCACTTCTCCTAACAAAAAGAAGGAAGCTATTGAACTTCTTGGAGCTGACTCATTTGTGGTTAGCAGTGAACAAGATCAAATGCAGGCTGCAACGGGCACCTTGGATGGTATCATTGACACAGTTTCTGCCGTCCATCCTTTGTTACCTTTGATTGGTCTTTTGAAATCTCATGGAAAACTTGTTATGGTTGGTGCACCTGAGAAGCCTCTGGAGCTACCAGTATTTCCTTTACTTATGGGGAGAAAGATAATAGGAGGGAGCCTGATCGGAGGAATTAAGGAGACACAAGAAATGATAGATTTTGCTGCTAAACATGACGTGAAACCTGAAATTGAAGTTGTTTCAGCTGATTATGTGAACACTGCATTGGAGCGTCTGCTTAAAGCAGATGTCAAATATCGATTTGTTATTGATATTGGGAATACATTGAAGAGCTCTTAA 1083 0.4303 MAISPELEHPRKAFGLAAKDSSGVLSPFIFSRRETGEKDVRFKVLFCGICHSDLHMLKNEWGNSVYPVVPGHEIVGEVTEVGDKVQKFKVGDKVGVGCMVQSCHSCQNCNESLENYCPKVILTYGSKNLDGTITYGGYSDTMVTDESFVISIPNSLPLDAAAPLLCAGITVYSPLKYFGLDKPNLQLGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIELLGADSFVVSSEQDQMQAATGTLDGIIDTVSAVHPLLPLIGLLKSHGKLVMVGAPEKPLELPVFPLLMGRKIIGGSLIGGIKETQEMIDFAAKHDVKPEIEVVSADYVNTALERLLKADVKYRFVIDIGNTLKSS* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2092 360 PANTHER ALDEHYDE REDUCTASE 1 359 - -
Mtr8g2092 360 Gene3D - 17 353 - -
Mtr8g2092 360 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Mtr8g2092 360 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 359 - -
Mtr8g2092 360 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Mtr8g2092 360 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Mtr8g2092 360 SUPERFAMILY GroES-like 23 183 IPR011032 -
Mtr8g2092 360 CDD CAD1 14 352 - -
Mtr8g2092 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Mtr8g2092 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Mtr8g2092 360 Gene3D - 167 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2092 Mtr-Chr8 30903848 30906908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2092 11 358 Monolignol Biosynthesis Gene Families AT4G37990 74.138 3.93e-177 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2092 - K23232 twl:119999099 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1295 5 13336566 13338544 Mtr8g2092 8 30903848 30906908 PCT