Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2086 ATGGCTATCTTCACCTATGCTTCATACAATAATCAAACCAAGAACACCTCATTTTCCATGTTAATCATAATTTTCACTTTGTTCTATGCGTTTTTCAATCCTGCACACTCAATTTCCTTTAACTTCACTAGCTTCCAATCAAACCTATATCTAATAAAATTCCAAGGTGATGCATTTTCCTCAAACAATGTTCTTCAGCTAACAAAAAACCAACTTGATGGCCCTATCACAAGAAGCGTCGGCCGCGCTTCGTTTGATCAACCTTTGAAGCTTTATGATAAAGAAACAAAAGAGCTCACTGATTTCACAACACATTTCACCTTTATTATGAGAGCTGTTAATTTATCGCTGTTTGGTGACGGTCTATCGTTCTTCATGGCTCCGTTTCAATCAGATATCCCAGAGAATTCAGCAGGTGGTTACCTTGGTTTATTCAGTAAGGAATCTGCACTCAATACTAGCAAAAACCAAATAGTAGCTGTTGAATTTGATAGTTATAGGAATGATTGGGATCCAAATTCTGATCATGTTGGAATCAATGTTAATTCGATTCAATCGGTTCAAAATGTTTCTTGGAAGAGTAGCATAAAAACCGGTGCGGTTGCGAATGCTTGGATATCATATAACTCAACTACAAAAAACCTTTCTGTTTTTCTTACTTATGTTAATAATCCAACTTTTCATGAAAACTCTACTCTTTCATATAATATTGATTTGAGTGAAGTTTTGCCAGAATATGTTAGGATTGGTTTTTCTGCTGCTACAGGTCAATGGATTGAAATACACAACATTCTAACTTGGTCTTTCAATTCAAGTTTGAAAAGTGGTAATGGAAAAAACATCAAGGTTGGTTTAGGAGTTGGTTTAAGTGTTGGTTTTGGTTCTTTAACTTGTTTGGTAGGTTTGTTATGGTTCACTTTTTGGAGAAAAAGAAAAGTGATAAATAAGGGAGAAAGGGACAATAATAGAGATTTTGACGCTTCTATCGATGAAGATGAATTCGAGAGAGGAACTGGTCCAAAAAGGTTCACTTACAAAGAACTAAGCAATTCAACAAATGGTTTCGATGAAAAAGGAAAGCTTGGAGAAGGTGGATTTGGAGGTGTTTACAAAGGTTTACTTGAAAAAAACAACAAATTAGAAGTGGCTGTGAAGAGGGTTTCAAAAGGGTCAAGACAAGGGAAAAAGGAATACATATCAGAAGTAAGAATAATAAGCAAGCTAAGACATAGAAATTTGGTTCAACTCTTAGGTTGGTGTCATGAAAAAAGTGAGCTTTTACTTGTTTATGAATACATGCCTAATGGAAGTCTTGATTATCATCTATTTGGTAAAGGGGTGATGCTTACTTGGAGTGTAAGGTACAAAATAGCATTAGGTATAGCATCATCTCTTCTTTATTTACATGAAGAGTGGGAACAATGTGTAGTGCATAGAGATATTAAGTCAAGTAATGTAATGTTAGATGCAAATTTCAATGCTAAACTTGGTGATTTTGGTCTTGCAAGACTAGTAGATCATGAACTTGGTTCTCAAACAACTGTTTTGGCAGGCACAATGGGATACTTAGCACCTGAATGTGTTACAACAGGGAAATCAAGTAAAGAATCTGATGTTTATAGTTTTGGTGTTGTTGCACTTGAAATCACATGTGGTAGAAGATCTATTGAGTCAAATGAAGAGGCTAAGAAAATTAGGCTTGTGGAATGGGTTTGGGAGTTATATGGAAAAGGTGAATTATTTGAAGGAGTTGATAGAGGATTAAATTTGGAATTTGATGAAAGGAAAATGGAATGCTTGATGGTAGTAGGGTTATGGTGTTGTCATCCAGATTTTACTATGAGGCCTTCTATAAGACAAGTGATTAATGTTTTGAATTTTGAAGCTCCTTTGCCAAGTCTTCCTTCAAAATTGCCAGTGCCTATGTACTTTGCACCTCCTATGGAAATGTGTAGATTTTCATATACTTCAGATGGTCTTACAAACACAACAAAAGGATCCTCTACTTATTCATCAATTTCAGCAGGATCTAGAAAATCTCTATTGTAG 2049 0.3524 MAIFTYASYNNQTKNTSFSMLIIIFTLFYAFFNPAHSISFNFTSFQSNLYLIKFQGDAFSSNNVLQLTKNQLDGPITRSVGRASFDQPLKLYDKETKELTDFTTHFTFIMRAVNLSLFGDGLSFFMAPFQSDIPENSAGGYLGLFSKESALNTSKNQIVAVEFDSYRNDWDPNSDHVGINVNSIQSVQNVSWKSSIKTGAVANAWISYNSTTKNLSVFLTYVNNPTFHENSTLSYNIDLSEVLPEYVRIGFSAATGQWIEIHNILTWSFNSSLKSGNGKNIKVGLGVGLSVGFGSLTCLVGLLWFTFWRKRKVINKGERDNNRDFDASIDEDEFERGTGPKRFTYKELSNSTNGFDEKGKLGEGGFGGVYKGLLEKNNKLEVAVKRVSKGSRQGKKEYISEVRIISKLRHRNLVQLLGWCHEKSELLLVYEYMPNGSLDYHLFGKGVMLTWSVRYKIALGIASSLLYLHEEWEQCVVHRDIKSSNVMLDANFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKSSKESDVYSFGVVALEITCGRRSIESNEEAKKIRLVEWVWELYGKGELFEGVDRGLNLEFDERKMECLMVVGLWCCHPDFTMRPSIRQVINVLNFEAPLPSLPSKLPVPMYFAPPMEMCRFSYTSDGLTNTTKGSSTYSSISAGSRKSLL* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2086 682 Pfam Protein kinase domain 356 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2086 682 Pfam Legume lectin domain 38 275 IPR001220 GO:0030246
Mtr8g2086 682 PANTHER - 29 658 - -
Mtr8g2086 682 CDD lectin_legume_LecRK_Arcelin_ConA 38 273 IPR001220 GO:0030246
Mtr8g2086 682 Gene3D Transferase(Phosphotransferase) domain 1 433 646 - -
Mtr8g2086 682 Gene3D - 35 283 - -
Mtr8g2086 682 SMART serkin_6 355 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2086 682 ProSiteProfiles Protein kinase domain profile. 355 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2086 682 ProSitePatterns Legume lectins beta-chain signature. 159 165 IPR019825 -
Mtr8g2086 682 PANTHER RECEPTOR LECTIN KINASE 29 658 - -
Mtr8g2086 682 SUPERFAMILY Protein kinase-like (PK-like) 339 648 IPR011009 -
Mtr8g2086 682 ProSitePatterns Legume lectins alpha-chain signature. 243 252 IPR000985 -
Mtr8g2086 682 Gene3D Phosphorylase Kinase; domain 1 340 432 - -
Mtr8g2086 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Mtr8g2086 682 ProSitePatterns Protein kinases ATP-binding region signature. 361 385 IPR017441 GO:0005524
Mtr8g2086 682 CDD STKc_IRAK 369 626 - -
Mtr8g2086 682 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 275 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2086 Mtr-Chr8 30816194 30818418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2086 19 643 Receptor kinase-like Gene Family AT5G10530 50.549 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr8g2086 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2086 - - gmx:100777201 1008.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1285 5 13265355 13266854 Mtr8g2086 8 30816194 30818418 PCT