Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2085 ATGGCAATCAATACTTCAAGGACTCAAATCCTTTTCATTACCATCATTTCCTTCCTTATTTTAGCTCAAAATGTAAACTCAGCTGCATTCACAGTCTCAAATTTTGACCCATACAAAACAAGCATTGAACTCGAAGGCAACGCCTTCATTTCAAACGGGTCCATCCATCTCACAAATGTCGTCCCAAATAGCGCTGGTAGAGCCTCTTGGGGTGGACCAGTGCGTCTTTGGGACGCACATACCGGTGACCTTGCCGGCTTCACTTCCGTCTTTTCTTTTGTAGTTGCACCTACCGGCCCCGGACTCTTTGGAGATGGAATTACCTTCTTCATTGCACCATTCAACTCTCACATCCCGAAAAATTCGAGTGGTGGATTCCTTGGACTATTCAACGCGGAAACTGCTTTGAATACATACCAAAATCGAATCGTTGCCGTTGAATTTGATTCCTTTGGTGGAAATCCTTGGGATCCAGTGTATCCCCATGTTGGCATTGATGTGAACTCTATTGCTTCAGTAACAACAGCTCCATGGAAAACCGGAAGTGTTGCGAATGGTTTCACCGCAATTGCTTTTGTGAATTACGAGCCTGTGGAGAAAAACTTAAGTGTTGTGGTAAGATACCCTGGAGGCAATTTTGTGAATGGAACTTCTAGCAGTGTCTCATTTATCATTGATTTGAGGAGTGTGTTACCTGAATGGGTTAGAATTGGGTTTTCTGGTGCAACTGGACAATTAGTTGAATTGCACAAGATTCTTTCATGGACTTTTAAGTCAAGCTTCCAGTAA 789 0.4309 MAINTSRTQILFITIISFLILAQNVNSAAFTVSNFDPYKTSIELEGNAFISNGSIHLTNVVPNSAGRASWGGPVRLWDAHTGDLAGFTSVFSFVVAPTGPGLFGDGITFFIAPFNSHIPKNSSGGFLGLFNAETALNTYQNRIVAVEFDSFGGNPWDPVYPHVGIDVNSIASVTTAPWKTGSVANGFTAIAFVNYEPVEKNLSVVVRYPGGNFVNGTSSSVSFIIDLRSVLPEWVRIGFSGATGQLVELHKILSWTFKSSFQ* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2085 262 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 261 IPR013320 -
Mtr8g2085 262 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 8 260 - -
Mtr8g2085 262 ProSitePatterns Legume lectins alpha-chain signature. 231 240 IPR000985 -
Mtr8g2085 262 CDD lectin_legume_LecRK_Arcelin_ConA 30 261 IPR001220 GO:0030246
Mtr8g2085 262 Pfam Legume lectin domain 28 260 IPR001220 GO:0030246
Mtr8g2085 262 Gene3D - 25 262 - -
Mtr8g2085 262 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Mtr8g2085 262 PANTHER LECTIN 8 260 - -
Mtr8g2085 262 PIRSF Plant_L_lectin 2 262 IPR016363 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2085 Mtr-Chr8 30811968 30812756 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2085 13 262 Receptor kinase-like Gene Family AT5G10530 38.077 1.78e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2085 - - aprc:113871630 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1284 5 13256660 13257520 Mtr8g2085 8 30811968 30812756 PCT
Mtr8g2085 8 30811968 30812756 Mtr5g1285 5 13265355 13266854 PCT