Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2084 ATGGCCATCAATACCTCAAGGACTCAAATCCTTTTCATTACCATCATTTCCTTCCTTATTTTAGCTCAAAATGTAAACTCAGCTGCATTCACAGTCTCAAATTTTGACCCATACAAAACAAACATTGAACTCGAAGGCAACGCCTTCATTTCAGACGGGTCTATCCATCTCACAAATGTCATCCCAAACAGCGCTGGTAGAGCCTCTTGGGGTGGACCAGTGCGTCTTTGGGACGCAGATACCGGTAACCTCGCCGGTTTCACTTCAGTCTTTTCTTTCGAAGTTGCACCTGCCGGCCCCGGACTCATTGGAGATGGAATTACCTTCTTCATTGCACCATTCAATTCTCACATCCCGAAAAATTCGAGTGGTGGATTCCTTGGACTATTCAACGCGGAAACTGCTTTGAATACGTACCAAAATCGAATTGTTGCCGTTGAATTTGATTCCTTTGGTGGAAATAGTGGTGGAAATCCTTGGGATCCCGCGTATCCCCATGTTGGCATTGATGTGAACTCTATTGCTTCGGTAACAACAGCGCCATGGAAAACCGGAAGTATTTTGACTGGTTTCAATGCAATTGCTTTTGTGAACTATGAACCCGTGGAAAAAAATTTAAGTGTTGTGGTAAGATACCCTGGAGGAAATTTTGTGAATGGAACTTCAAACAGTGTCTCCTTTATTATTGATTTAAGGACTGTGTTACCTGAATGGGTTAGAATTGGGTTTTCTGGTGCAACTGGACAATTGGTTGAATTGCACAAGATTCTTTCTTGGACTTTTAAGTCAAGCTTCCAGTGA 801 0.427 MAINTSRTQILFITIISFLILAQNVNSAAFTVSNFDPYKTNIELEGNAFISDGSIHLTNVIPNSAGRASWGGPVRLWDADTGNLAGFTSVFSFEVAPAGPGLIGDGITFFIAPFNSHIPKNSSGGFLGLFNAETALNTYQNRIVAVEFDSFGGNSGGNPWDPAYPHVGIDVNSIASVTTAPWKTGSILTGFNAIAFVNYEPVEKNLSVVVRYPGGNFVNGTSNSVSFIIDLRTVLPEWVRIGFSGATGQLVELHKILSWTFKSSFQ* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2084 266 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 265 IPR013320 -
Mtr8g2084 266 Pfam Legume lectin domain 28 264 IPR001220 GO:0030246
Mtr8g2084 266 Gene3D - 25 266 - -
Mtr8g2084 266 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 8 264 - -
Mtr8g2084 266 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Mtr8g2084 266 CDD lectin_legume_LecRK_Arcelin_ConA 30 265 IPR001220 GO:0030246
Mtr8g2084 266 PANTHER LECTIN 8 264 - -
Mtr8g2084 266 PIRSF Plant_L_lectin 2 266 IPR016363 GO:0030246
Mtr8g2084 266 ProSitePatterns Legume lectins alpha-chain signature. 235 244 IPR000985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2084 Mtr-Chr8 30808703 30809744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2084 13 266 Receptor kinase-like Gene Family AT5G10530 36.604 9.04e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2084 - - aprc:113871630 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2084 8 30808703 30809744 Mtr5g1284 5 13256660 13257520 PCT