Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2079 ATGGCTCCTTGTTTCTATACCCTTCCATTGTTCTTCTTGTCCTTAATTTTATTAACTTTCCATGCTTATTCAATTCACTTCCAAATTCCCAGTTTTAATCCAAATGATGCCAACATAATCTACCAAGGTTCTGCAGCACCAGTTGATGGAGAAGTTGATTTTAACATCAATGGAAATTATTCATGTCAAGTTGGATGGGCTTTGTATTCCAAAAAGGTGTTACTTTGGGACTCAAAAACAGGTCAACTCACTGACTTCACAACTCACTACACTTTTATCATCAACACTCGAGGTAGATCACCTTCATTCTATGGCCATGGCCTTGCCTTTTTCTTAGCTGCTTATGGATTTGAAATCCCACCAAACTCCTCTGGTGGCTTGATGGGACTATTCAACACCACAACAATGCTTTCATCTAGTAACCATATTGTTCATGTGGAGTTTGATTCTTTCGCAAATAGTGAATTTAGCGAGACAACAGAGCATGTGGGAATCAACAATAATTCAATCAAATCATCAATATCAACACCTTGGAATGCAAGTTTACATAGTGGAGACACTGCTGAGGTATGGATTAGGTACAATTCTACAACCAAGAATTTGACTGTATCTTGGGAATATCAAACGACCTCTAGTCCTCAAGAAAAAACTAATCTTTCATATCAAATTGATTTCAAGAAAGTTTTACCTGAATGGGTTACAATTGGATTTTCTGCTGCAACTGGTTACAATGGAGAAGTAAATAATCTTTTGTCATGGGAATTTAATTCCAATTTGGAGAAAAGTGATGATAGTAATAGTAAAGATACAAGATTAGTTGTGATACTAACAGTCTCTTTAGGGGCTGTAATTATAGGAGTGGGAGCATTGGTAGCATATGTAATACTAAAGAGGAAAAGAAAGAGAAGTGAAAAGCAAAAGGAAGAGGCTATGCATTTGACTTCAATGAATGATGACCTTGAAAGAGGAGCAGGGCCAAGGAGGTTTACCTACAAAGAACTTGAGTTGGCAACCAATAACTTTTCTAAGGATAGAAAGTTGGGTCAAGGTGGTTTTGGAGCAGTTTTTAAAGGTTACTTTGCTGATTTAGATTTACAAGTTGCTGTGAAGAAAATATCCAGAGGGTCAAGACAAGGAAAGAAAGAGTATGTAACTGAAGTTAAAGTTATTAGTCAACTGAGACATAGGAATCTTGTGAAGCTCTTAGGCTGGTGCCATGACAAAGGTGAGTTTCTACTTATTTATGAGTTCATGCCAAATGGTAGTCTTGATTCTCATTTATTTGGTAAAAGAACACCTCTTTCTTGGGGTGTAAGGCACAAAATAACTCTTGGATTGGCCTCTGGTTTGCTGTATCTACATGAAGAATGGGAGAGGTGTGTGGTACATAGGGATATTAAATCAAGTAATGTTATGCTAGATTCAAGTTTTAATGTTAAGCTTGGTGATTTTGGGTTGGCTAAATTAATGGACCATGAACTTGGGCCTCAAACGACGGGGCTGGCCGGAACATTCGGCTATCTAGCTCCAGAATATGTGAGTACAGGAAGGGCGAGTAAAGAGTCAGATGTTTATAGTTTTGGGATAGTTGTCTTAGAGATAACCTCCGGAAAAAAAGCTACTGAAGTTATGAAGGAGAAAGATGAAGAGAAGGGAATGATTGAGTGGGTTTGGGATCATTATGGAAAAGGAGAGCTACTTGTGGCAATGGATGAGAATTTGAGGAAAGATTTTGATGAGAAACAAGTAGAGTGCTTGATGATTGTTGGATTATGGTGTGCTCATCCTGATGTTAGTCTAAGACCATCAATTAGACAAGCCATTCAAGTGCTTAATTTTGAGGTTTCCATGCCAAATCTTCCGCCAAAGAGGCCAGTTGCAACCTATCATGCTCCCACACCATCTGTAAGCTCCGTAGAAGCTTCCATAACCAATAGCCTTCAAGACGGTCGTTAA 1956 0.3839 MAPCFYTLPLFFLSLILLTFHAYSIHFQIPSFNPNDANIIYQGSAAPVDGEVDFNINGNYSCQVGWALYSKKVLLWDSKTGQLTDFTTHYTFIINTRGRSPSFYGHGLAFFLAAYGFEIPPNSSGGLMGLFNTTTMLSSSNHIVHVEFDSFANSEFSETTEHVGINNNSIKSSISTPWNASLHSGDTAEVWIRYNSTTKNLTVSWEYQTTSSPQEKTNLSYQIDFKKVLPEWVTIGFSAATGYNGEVNNLLSWEFNSNLEKSDDSNSKDTRLVVILTVSLGAVIIGVGALVAYVILKRKRKRSEKQKEEAMHLTSMNDDLERGAGPRRFTYKELELATNNFSKDRKLGQGGFGAVFKGYFADLDLQVAVKKISRGSRQGKKEYVTEVKVISQLRHRNLVKLLGWCHDKGEFLLIYEFMPNGSLDSHLFGKRTPLSWGVRHKITLGLASGLLYLHEEWERCVVHRDIKSSNVMLDSSFNVKLGDFGLAKLMDHELGPQTTGLAGTFGYLAPEYVSTGRASKESDVYSFGIVVLEITSGKKATEVMKEKDEEKGMIEWVWDHYGKGELLVAMDENLRKDFDEKQVECLMIVGLWCAHPDVSLRPSIRQAIQVLNFEVSMPNLPPKRPVATYHAPTPSVSSVEASITNSLQDGR* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2079 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Mtr8g2079 651 SUPERFAMILY Protein kinase-like (PK-like) 325 628 IPR011009 -
Mtr8g2079 651 CDD STKc_IRAK 347 612 - -
Mtr8g2079 651 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Mtr8g2079 651 CDD lectin_legume_LecRK_Arcelin_ConA 25 259 IPR001220 GO:0030246
Mtr8g2079 651 PANTHER PUTATIVE-RELATED 15 646 - -
Mtr8g2079 651 PANTHER - 15 646 - -
Mtr8g2079 651 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 273 IPR013320 -
Mtr8g2079 651 Pfam Protein kinase domain 341 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2079 651 Gene3D Transferase(Phosphotransferase) domain 1 418 633 - -
Mtr8g2079 651 ProSitePatterns Protein kinases ATP-binding region signature. 347 371 IPR017441 GO:0005524
Mtr8g2079 651 SMART serkin_6 341 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2079 651 ProSitePatterns Legume lectins alpha-chain signature. 229 238 IPR000985 -
Mtr8g2079 651 Pfam Legume lectin domain 25 268 IPR001220 GO:0030246
Mtr8g2079 651 Gene3D - 23 274 - -
Mtr8g2079 651 ProSiteProfiles Protein kinase domain profile. 341 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2079 Mtr-Chr8 30778925 30781177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2079 10 630 Receptor kinase-like Gene Family AT5G10530 58.080 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr8g2079 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2079 - - mtr:MTR_8g067690 1001.12