Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2078 ATGTTAAAGATTATCTCAAAATTGTCAAAGCTCATCGTTTCTGTTGAAACTCAAAGCATGGCTTCCAGTCTCTATATCCTAACCCTTTTCTACATGTCCTTAATTTTCTTCAATATCCCAGCTAGCTCAATTCACTTCAAATATCCCAGTTTTGATCCTAGTGATGCCAACATAGTCTATCAAGGTTCTGCAGCACCTCGTGATGGAGAAGTTAATTTCAACATCAATGAAAATTATTCATGTCAAGTTGGAAGAGTCTTCTATTCAGAAAAAGTGTTACTTTGGGATTCAAACACAGGAAAACTCACTGACTTCACAACTCATTACACTTTTGTCATCAACACTCAAGGTAGATCACCTTCATTATATGGCCATGGTCTTGCCTTTTTCTTGGTTCCTTATGGATTTGAAATCCCCCTCAATTCTGATGGTGGCTTTATGGGTCTATTTAACACCACAACAATGGTTTCATCTAGTAACCAAATTGTTCATGTAGAATTTGATTCTTTCGCAAATCGTGAATTTCGCGAGGCAAGAGGTCATGTGGGAATCAACATTAATTCAATCATTTCATCAGCTACGACACCTTGGAATGCCAGCAAACATAGTGGAGACACTGCTGAGGTATGGATTAGGTACAATTCTACAACCAAGAATTTGACCGTATCTTGGAAATACCAAACTACCTCAAATCCTCAAGAAAATACTAGTCTTTCAATTTCAATTGATTTAATGAAAGTTATGCCTGAATGGATTACTGTAGGATTTTCTGCTGCAACAAGTTATGTTCAAGAATTAAATTATCTTTTGTCATGGGAATTCAACTCCACTTTGGCCACAAGTGGTGATAGTAAAACAAAAGAGACAAGATTAGTTATAATACTAACGGTTTCTTGTGGGGTTATAGTTATAGGAGTGGGAGCATTAGTAGCATACGCATTATTTTGGAGGAAAAGAAAGAGAAGTAATAAGCAAAAGGAAGAGGCTATGCATTTGACTTCAATGAATGATGATCTTGAAAGAGGAGCAGGGCCAAGAAGGTTCACCTACAAAGAACTTGATTTGGCAACCAATAACTTCTCTAAGGATAGAAAGTTGGGTCAAGGTGGTTTTGGAGCTGTTTATAAAGGTTACTTTGCTGATTTAGATTTACAAGTTGCTGTGAAGAAAATATCAAGAGGATCAAGACAAGGAAAGAAAGAGTATGTAACTGAAGTTAAAGTCATTAGTCAACTGAGACATAGGAATCTTGTGAAGCTTTTGGGTTGGTGCCATGACAAAGGTGAGTTTCTACTTGTTTATGAGTTCATGCCAAATGGTAGTCTTGATTCTCATTTATTTGGTAAAAGAACACCTCTTTCTTGGGGTGTAAGGCACAAAATAGCTCTTGGATTGGCTTCTGGTTTGCTTTATCTACATGAAGAATGGGAGAGGTGTGTGGTTCATAGGGATATTAAATCAAGTAATGTTATGTTAGACTCAAGTTTCAATGTCAAGCTTGGTGATTTTGGGTTGGCTAAGTTAATGGACCATGAACTTGGGCCGCAAACAACTGGGCTGGCCGGAACATTTGGCTATCTAGCTCCGGAATATGTGAGCACAGGTAGGGCAAGTAAAGAGTCAGATGTGTATAGTTTTGGGATAGTTGCTTTGGAGATAACTACTGGTAAGAAAGCTACTAAAGTGATGAAGCAAAAAAATGAAGAGCAGGGAATGATTGAATGGATTTGGGATCATTATGGAAGTGGAGAGCTACTTGTCGCCATGGATGAAAATTTGCAAAATGATTTTGATGAGAAAGAAGTAGAGTGCTTGATGATTGTTGGATTGTGGTGTGCTCATCCTGATGTTAGTCTTAGACCATCGATTAGACAAGCAATTCAAGTGCTTAATTTTGAGGTTGCCTTGCCAAATCTTCCACCAAAGAGGCCAGTTGCAACCTATCATGTTCCTTCATCATCGGTAAGCTCTGTAGAAGCTTCCATAACCAATAGCCTTCAAGATGGTCGTTAA 2013 0.381 MLKIISKLSKLIVSVETQSMASSLYILTLFYMSLIFFNIPASSIHFKYPSFDPSDANIVYQGSAAPRDGEVNFNINENYSCQVGRVFYSEKVLLWDSNTGKLTDFTTHYTFVINTQGRSPSLYGHGLAFFLVPYGFEIPLNSDGGFMGLFNTTTMVSSSNQIVHVEFDSFANREFREARGHVGININSIISSATTPWNASKHSGDTAEVWIRYNSTTKNLTVSWKYQTTSNPQENTSLSISIDLMKVMPEWITVGFSAATSYVQELNYLLSWEFNSTLATSGDSKTKETRLVIILTVSCGVIVIGVGALVAYALFWRKRKRSNKQKEEAMHLTSMNDDLERGAGPRRFTYKELDLATNNFSKDRKLGQGGFGAVYKGYFADLDLQVAVKKISRGSRQGKKEYVTEVKVISQLRHRNLVKLLGWCHDKGEFLLVYEFMPNGSLDSHLFGKRTPLSWGVRHKIALGLASGLLYLHEEWERCVVHRDIKSSNVMLDSSFNVKLGDFGLAKLMDHELGPQTTGLAGTFGYLAPEYVSTGRASKESDVYSFGIVALEITTGKKATKVMKQKNEEQGMIEWIWDHYGSGELLVAMDENLQNDFDEKEVECLMIVGLWCAHPDVSLRPSIRQAIQVLNFEVALPNLPPKRPVATYHVPSSSVSSVEASITNSLQDGR* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2078 670 Gene3D Phosphorylase Kinase; domain 1 345 436 - -
Mtr8g2078 670 CDD STKc_IRAK 366 631 - -
Mtr8g2078 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 41 288 IPR013320 -
Mtr8g2078 670 PANTHER - 41 665 - -
Mtr8g2078 670 PANTHER PUTATIVE-RELATED 41 665 - -
Mtr8g2078 670 Pfam Protein kinase domain 360 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2078 670 Gene3D - 41 293 - -
Mtr8g2078 670 SMART serkin_6 360 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2078 670 ProSitePatterns Protein kinases ATP-binding region signature. 366 390 IPR017441 GO:0005524
Mtr8g2078 670 Pfam Legume lectin domain 44 287 IPR001220 GO:0030246
Mtr8g2078 670 SUPERFAMILY Protein kinase-like (PK-like) 344 650 IPR011009 -
Mtr8g2078 670 ProSiteProfiles Protein kinase domain profile. 360 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2078 670 CDD lectin_legume_LecRK_Arcelin_ConA 44 278 IPR001220 GO:0030246
Mtr8g2078 670 Gene3D Transferase(Phosphotransferase) domain 1 437 652 - -
Mtr8g2078 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2078 Mtr-Chr8 30768812 30770922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2078 20 649 Receptor kinase-like Gene Family AT5G10530 56.151 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr8g2078 Pkinase 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2078 - - mtr:MTR_8g067690 973.385