Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2077 ATGTCTTCCAGTTTCTATACCCTTCCCCTAGTCTTCTTGTCCTTAAATTTCTTAATTTTCCCTTCTAATTCAATTCACTTCCAAATTTCTCATTTTAATCCTAGTGATGCCAACATAGTCTACCAAGGTTCTGCAGCACCAATCGATGGAGAGGTTGATTTCAACATCAATGATGCATATTATACTAGTCAAGTTGGAAGAGTCATATTTTCCAAGAAAGTTTTACTATGGGACTCAAAAATAGGTCAACTCACTGACTTCACAACCCATTACACCTTTATTATCGACACTCAAAATAGTTCTAGATATGGCCATGGAATTGCATTTTTCTTGGTTCCTTTTGGATTTGAAATCCCACCTAATTCTGCTGGTGCCTTTTTTGGTCTATTTAACACCACGACAATGAATTCAACCAGTAACCTTCTTCATGTGGAGTTTGATTCTTACGCAAATCGTCCCTGGGGTGAGACAACGGAGCATGTGGGAATCAACAACAATTCAATCATTTCATCGGTGTCAACACCTTGGAACGCAAGTTTACATAGTGGAGAAACTACTGAGGTATGGATTAACTATAATTCTACAACCAAAAATTTGAATGTATCTTGGAAATATCAAAACACCTATGATCCTCAAGAAAAAACTAGTATTTCATATGAAATTGACTTAATAAAGGTCCTACCTGAATGGGTTACTATAGGAATTTCTGCTTCAACAGGTTCCATTGGAGAAAAGCACAAACTTCTATCTTGGGAATTCAGTTCCACTTTGGAACAAAGTGATAATGATAATAATACAAAAAGGACTAGATTAGTTGTGATACTAGCAGTCACGTGTGGGATTGTAGTTATGGGAGTGGGAGCACTGGCAATATATGCATTACTTTGGAGGAAAATAAAGAGAAGTAAAAAGAAAAAGGAAGAGGCTATGCATTTAAGAACAATGAATGATGACCTTCAAAGAGGAGCAGGGCCAAGGAGGTTTACCTACCAAGAACTTGATTTGGCTACCAATAAATTTACCGACGATAGAAAATTAGGTCAAGGTGGTTTTGGAGCTGTTTATAAAGGTTACTTTTTCGATCAAGATTTAGCCGTTGCTGTGAAGAAAATATCAAGAGGGTCAAGACAAGGGAAGAAAGAGTATGTAACTGAAGTTAAAGTTATTAGCCAGCTGAGACATAGGAATCTTGTGAAGCTCTTAGGATGGTGCCATGACAAAGGTGAGTTTCTACTTGTTTATGAGTTCATGCCAAATGGTAGTCTTGATTCTCATTTATTCGGAAAAAGGACACCTCTTTCTTGGAGTGTAAGACATAAAATAGCTCTTGGATTGGCTTTTGGGGTACTTTATCTACATGAAGAATGGGAGAGGTGTGTGGTTCATAGAGATATCAAATCAAGTAATGTTATGCTAGATTCTAGTTTCAATGTTAAGCTTGGTGACTTTGGGTTGGCTAAACTAATGGATCATGAGATTGGACCCCAAACAACAGTGGTTGCCGGAACCTTAGGCTATTTGGCTCCAGAATATATAAGTACAGGTAAGGCTAGCAAAGAGTCAGATGTGTATAGTTTTGGGGTTGTTGCCTTGGAGATCACAACTGGACGGAAAGCTGTTGAAGTTATGAGGGATAAAGATGGAGATAAGGGATTGATTGAGTGGGTTTGGGATCATCATGGAAGAGGAGAGCTACTTGTGACCATGGATGAGAATTTGCGAAAGGATTTCGATGAGAAACAAGTAGAGTGTTTGTTGATTGTTGGATTATGGTGTGCTCATCCTGATGTAAGTCTAAGACCATCCATTAGACAAGCAATTCAAGTGCTAAATTTTGAGATTGCTTTGCCAAATCTTCCCCTGAATAGGCCTATTGCAACCTATCATGCTCCTACACCGACTCTAAGCTCGGTAGAAGCTTCCATAACCACAAGTCTTCAACATGGTCGTTAA 1953 0.3845 MSSSFYTLPLVFLSLNFLIFPSNSIHFQISHFNPSDANIVYQGSAAPIDGEVDFNINDAYYTSQVGRVIFSKKVLLWDSKIGQLTDFTTHYTFIIDTQNSSRYGHGIAFFLVPFGFEIPPNSAGAFFGLFNTTTMNSTSNLLHVEFDSYANRPWGETTEHVGINNNSIISSVSTPWNASLHSGETTEVWINYNSTTKNLNVSWKYQNTYDPQEKTSISYEIDLIKVLPEWVTIGISASTGSIGEKHKLLSWEFSSTLEQSDNDNNTKRTRLVVILAVTCGIVVMGVGALAIYALLWRKIKRSKKKKEEAMHLRTMNDDLQRGAGPRRFTYQELDLATNKFTDDRKLGQGGFGAVYKGYFFDQDLAVAVKKISRGSRQGKKEYVTEVKVISQLRHRNLVKLLGWCHDKGEFLLVYEFMPNGSLDSHLFGKRTPLSWSVRHKIALGLAFGVLYLHEEWERCVVHRDIKSSNVMLDSSFNVKLGDFGLAKLMDHEIGPQTTVVAGTLGYLAPEYISTGKASKESDVYSFGVVALEITTGRKAVEVMRDKDGDKGLIEWVWDHHGRGELLVTMDENLRKDFDEKQVECLLIVGLWCAHPDVSLRPSIRQAIQVLNFEIALPNLPLNRPIATYHAPTPTLSSVEASITTSLQHGR* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2077 650 SUPERFAMILY Protein kinase-like (PK-like) 324 626 IPR011009 -
Mtr8g2077 650 ProSitePatterns Protein kinases ATP-binding region signature. 346 370 IPR017441 GO:0005524
Mtr8g2077 650 ProSiteProfiles Protein kinase domain profile. 340 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2077 650 Pfam Legume lectin domain 25 267 IPR001220 GO:0030246
Mtr8g2077 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Mtr8g2077 650 PANTHER PUTATIVE-RELATED 17 645 - -
Mtr8g2077 650 CDD lectin_legume_LecRK_Arcelin_ConA 25 257 IPR001220 GO:0030246
Mtr8g2077 650 SMART serkin_6 340 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2077 650 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Mtr8g2077 650 PANTHER - 17 645 - -
Mtr8g2077 650 Pfam Protein kinase domain 340 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2077 650 Gene3D - 22 280 - -
Mtr8g2077 650 Gene3D Transferase(Phosphotransferase) domain 1 417 631 - -
Mtr8g2077 650 CDD STKc_IRAK 346 611 - -
Mtr8g2077 650 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 264 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2077 Mtr-Chr8 30762762 30764841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2077 24 650 Receptor kinase-like Gene Family AT5G10530 55.329 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr8g2077 Pkinase 9.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2077 - - mtr:MTR_8g067690 983.786