Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2053 ATGGCGTTTGAAAATCAAGATACTGTCCGTGAAATTAAGCCCAAAAACAGGAGAATCATGGGTGCTGGAGGTCCTGATGATGAGGAAAACAGGTGGCCACCATGGTTGAAACCTCTGCTGAAAGAGCGTTTCTTTGTTCAATGCAAGTTGCATGCTGATTCACACAAGAGTGAGTGCAATATGTATTGTTTGGATTGTATGAATGGTGCTCTTTGCTCACTCTGTCTCAATTACCACAAAGATCATCGTGCTATTCAGATAAGGAGGTCTTCATACCATGATGTGATTAGGGTGAATGAGATTCAGAAAGTGTTGGACATAACAGGTGTTCAAACCTATATTATCAACAGTGCAAGGGTTGTGTTCTTGAATGAGAGGCCTCAGCCAAGGCCCGGAAAAGGTGTCACCAACACTTGTGAAGTCTGCGAGCGTAGCCTTCTCGATTCCTTTCGATTCTGTTCTCTTGGCTGCAAGATTGTTGGAACTTCAATGAATTTCCAGAAGAAGAACAAGTCAGCTCGTGCTTCAATGATATCAGACTCAGAGGATTCACACAGCAGCAGTTGCAGCCATGGAAGACTGAAGAACATTAAGGTGCAAAGCTTCACTCCTTCAACACCACCACCAACAGTCAATTACAGATCAGCCAAAAGAAGAAAGGGAATTCCGCATCGTGCCCCAATGGGAGGACTAGTGCTGCAATACTAA 708 0.4407 MAFENQDTVREIKPKNRRIMGAGGPDDEENRWPPWLKPLLKERFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLNYHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSMNFQKKNKSARASMISDSEDSHSSSCSHGRLKNIKVQSFTPSTPPPTVNYRSAKRRKGIPHRAPMGGLVLQY* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2053 235 MobiDBLite consensus disorder prediction 197 212 - -
Mtr8g2053 235 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 231 - -
Mtr8g2053 235 Pfam PLATZ transcription factor 88 159 IPR006734 -
Mtr8g2053 235 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 231 - -
Mtr8g2053 235 MobiDBLite consensus disorder prediction 197 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2053 Mtr-Chr8 30379591 30382904 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mtr8g2053 PLATZ 4.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2053 - - mtr:MTR_8g066820 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2053 8 30379591 30382904 Mtr8g2053 8 30379591 30382904 ECH
Mtr5g1239 5 12713745 12716016 Mtr8g2053 8 30379591 30382904 PCT