Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2045 ATGATTCTCTCTCCATATTTCTTCAGTGAAATCCATTCCACATGCCTACATGTTGTCCTTCTCATATTTTTGCAACCTAAGAATACTGTTATTGCCTTAGGAAATGACACAGACCAACTATCATTGCTAAGTTTCAAAGATGCAGTAGTTGATCCTTTTCATATCTTGACTTATTGGAATAGTTCAACTAATTTTTGCTACTGGCATGGAGTCACCTGCAGCCCAAGGCATCAAAGGGTGATTGCCTTGAACCTACAAGGGTATGGTTTACAAGGGATTATACCACCTGTGATTGGCAACCTCACCTTTCTGAGGTATGTCAACCTTCAAAACAACAGCTTCTATGGTGAAATCCCACGAGAATTAGGTCAGTTGTTCTGGCTAGAAGACCTGTATCTTACCAATAACACACTTAGAGGTCAAATTCCCGCCGTTTTGTCTAATTGTTCTGAACTGAAGATCTTGAGCCTAACAGGAAACAAACTTGTTGGAAAAATACCTTTAGAGCTTGGCTTTCTAACTAAACTAGAAGTGCTATCTATTGGTATGAACAATTTGACAGGAGAAATCCCTTCATTTATAGGAAATCTTTCATCACTTAGTATTCTCATTTTGGGATTCAACAACTTAGAGGGAAAGGTGCCTGAAGAGATAGGCAATCTTAAAAGTTTGACTCGTATCTCTATTACAACCAACAAACTATCTGGTATGCTTCCTTCTAAACTCTATAACATGTCATATCTCACTTTATTCTCAGCTGGAATCAACCAATTTAATGGCTCTCTACCTTCAAACATGTTCCTCACACTCCCTAATCTCCAAGTATTTGGCATTGGTATGAATAAGATCTCGGGTCCTATCCCATCGTCCATATCCAATGCATCCCGTTTGTTGTTATTTAACATCCCGTATAATAACATTGTCGGACCAGTTCCCACCGGAATAGGATATCTCAAAGATGTATGGTCAGTTGCTATGGGAAACAATCATCTTGGTAATAATTCATCTCATGACTTGGATTTCTTGACATCTTTGACAAACTGCACAAACTTACGAGTGTTGCATTTAAATCTGAACAACTTTGGTGGTTCTTTACCTAAATCTGTAGCCAACTTATCTAGTCAACTAAACCAGTTTGATATTAGTCACAATAAGATTACAGGGACTGTTCCTGAAGGACTAGGAAATATCATCAACTTGATTGGCATCAACATGAAGTTCAACCTTTTGACAGGCTCGATTCCAGCTTCTTTTGGAAAACTTCAAAAGATACAATCACTGACGCTGAATGTAAACAAACTTTCAGCAGAAATTCCATCATCTCTTGGCAACCTTAGTAAGTTGTTTAAACTTGATTTGTCAAATAACATGCTAGAAGGAAGCATTCCTCCTAGTATTAGGAATTGCCAAATGTTGCAGTACCTGGACCTTTCAAAGAACCATCTTATTGGAACTATTCCTTTCGAACTCTTTGGTCTTCCCTCTTTGTCGTTGTTACTCAACTTATCCCACAACTCATTTAAAGGAAGCCTTCCCTCTGAAATTGGTAAGCTGAAAAGCATTGATAAGTTGGATGCTTCTGAAAATGTTCTTTCAGGTGAAATTCCGGAAGAAATTGGGAAGTGCATAAGCTTGGAATACCTTAACCTACAAGGTAACTCCTTCCATGGAGCCATGCCTTCTTCTTTGGCATCATTGAAAGGCCTTCAGTATTTAGATTTATCACGAAACAACTTGTCTGGATCATTTCCACAAGATTTAGAGAGTATCCCTTTTCTACAATACTTGAATATTTCTTTTAATAGGTTGGATGGTAAAGTGCCAACAAAGGGTGTCTTTAGAAATGTAAGTGCAATATCATTGAAAAACAACAGTGACCTTTGTGGGGGTATCACAGAGCTACATCTACCACCGTGCCCCGCCATAGATAAGACACAAACAACAGATCAGGCCTGGAAGACAATAGTAATAACAATTACTACGGTTTTCTTTTTTCTAGTGTTTTCATTCTCACTTTCAGTCTTTTGGATGAAAAAACCAAACTTGACAACTTCCACTTCGGCATCCACAATGCATCATCTTCCGAAGGTTTCGTACCAGATGCTCCACCAAGCAACAAATGGATTCTCTTCAAACAACTTGATAGGATTTGGTGGTTTTGGATTTGTATATAAAGGAATTCTTGAATCAGAAGGAAGAGTTGTTGCTATAAAGGTCTTGAACCTTCAAATCAAGGGAGCTCATGCGAGTTTCATTGCTGAGTGTAATGCGCTCAAATGTATCCGTCACAGGAACCTAGTTAAGATTCTCACATGTTGCTCAAGCATGGATTTCAATGGTAATGAAATCAAAGCATTGGTTTTTGAGTACATGCAAAACGGAAGCTTAGAGAAATGGTTGTATCCTCACGAGTCAGAAATTGATGATCAACCAAGTTTGAACCTTCTCCAGAGACTAAATATTATCATAGATGTTGCTTCTGCAATACACTATATTCACTGTGAATCTGAGCAGCCAATCATCCATTGTGATTTAAAACCAAATAACATTCTTCTTGACAATGACATGGTTGCTCGTGTTAGTGATTTTGGACTAGCAAAACTTGTCTGTGCCGTCAATGGCATCTCCGATCTACAGACTAGCACAATTGGAATTAAGGGAACTATTGGATATGCTCCTCCAGAATATGGAATGGGATGTCAAGTATCAACACTAGGTGATGTGTATAGCTTTGGAATCCTGGTGCTGGAAATACTAACTGGAAGGAAACCTACAGATAAAATGTTCACAAACGGTATGAATCTCCATTGGTTTGTCAAGGTTTCCTTGCCAGATAAACTTTTAGAGAGAGTGGATTCAACCCTACTCCCAAGAGAATCAAGTCACTTGCATCCTAATGACGTGAAGCGGTGCTTGCTAAAACTCTCATATATTGGACTTGCTTGTACAGAAGAGTCTCCAAAAGAAAGAATGAGTATCAAGGATGTCACTAGGGAGCTAGATAAAATCAGAATTTCTCTTTCTAAGAAGTAG 3033 0.3848 MILSPYFFSEIHSTCLHVVLLIFLQPKNTVIALGNDTDQLSLLSFKDAVVDPFHILTYWNSSTNFCYWHGVTCSPRHQRVIALNLQGYGLQGIIPPVIGNLTFLRYVNLQNNSFYGEIPRELGQLFWLEDLYLTNNTLRGQIPAVLSNCSELKILSLTGNKLVGKIPLELGFLTKLEVLSIGMNNLTGEIPSFIGNLSSLSILILGFNNLEGKVPEEIGNLKSLTRISITTNKLSGMLPSKLYNMSYLTLFSAGINQFNGSLPSNMFLTLPNLQVFGIGMNKISGPIPSSISNASRLLLFNIPYNNIVGPVPTGIGYLKDVWSVAMGNNHLGNNSSHDLDFLTSLTNCTNLRVLHLNLNNFGGSLPKSVANLSSQLNQFDISHNKITGTVPEGLGNIINLIGINMKFNLLTGSIPASFGKLQKIQSLTLNVNKLSAEIPSSLGNLSKLFKLDLSNNMLEGSIPPSIRNCQMLQYLDLSKNHLIGTIPFELFGLPSLSLLLNLSHNSFKGSLPSEIGKLKSIDKLDASENVLSGEIPEEIGKCISLEYLNLQGNSFHGAMPSSLASLKGLQYLDLSRNNLSGSFPQDLESIPFLQYLNISFNRLDGKVPTKGVFRNVSAISLKNNSDLCGGITELHLPPCPAIDKTQTTDQAWKTIVITITTVFFFLVFSFSLSVFWMKKPNLTTSTSASTMHHLPKVSYQMLHQATNGFSSNNLIGFGGFGFVYKGILESEGRVVAIKVLNLQIKGAHASFIAECNALKCIRHRNLVKILTCCSSMDFNGNEIKALVFEYMQNGSLEKWLYPHESEIDDQPSLNLLQRLNIIIDVASAIHYIHCESEQPIIHCDLKPNNILLDNDMVARVSDFGLAKLVCAVNGISDLQTSTIGIKGTIGYAPPEYGMGCQVSTLGDVYSFGILVLEILTGRKPTDKMFTNGMNLHWFVKVSLPDKLLERVDSTLLPRESSHLHPNDVKRCLLKLSYIGLACTEESPKERMSIKDVTRELDKIRISLSKK* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2045 1010 SMART serkin_6 709 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2045 1010 ProSiteProfiles Protein kinase domain profile. 709 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2045 1010 SUPERFAMILY L domain-like 37 331 - -
Mtr8g2045 1010 Pfam Leucine rich repeat 544 603 IPR001611 GO:0005515
Mtr8g2045 1010 ProSitePatterns Protein kinases ATP-binding region signature. 715 738 IPR017441 GO:0005524
Mtr8g2045 1010 Gene3D Ribonuclease Inhibitor 332 436 IPR032675 -
Mtr8g2045 1010 Pfam Protein kinase domain 711 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2045 1010 Gene3D Ribonuclease Inhibitor 437 647 IPR032675 -
Mtr8g2045 1010 PANTHER OS04G0122200 PROTEIN 23 1003 - -
Mtr8g2045 1010 Gene3D Phosphorylase Kinase; domain 1 673 790 - -
Mtr8g2045 1010 PANTHER LRR RECEPTOR-LIKE KINASE 23 1003 - -
Mtr8g2045 1010 SUPERFAMILY Protein kinase-like (PK-like) 682 1000 IPR011009 -
Mtr8g2045 1010 Gene3D Ribonuclease Inhibitor 34 329 IPR032675 -
Mtr8g2045 1010 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Mtr8g2045 1010 Pfam Leucine Rich Repeat 448 469 IPR001611 GO:0005515
Mtr8g2045 1010 SUPERFAMILY L domain-like 375 629 - -
Mtr8g2045 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Mtr8g2045 1010 Gene3D Transferase(Phosphotransferase) domain 1 791 1010 - -
Mtr8g2045 1010 SMART LRR_typ_2 493 518 IPR003591 -
Mtr8g2045 1010 SMART LRR_typ_2 101 125 IPR003591 -
Mtr8g2045 1010 SMART LRR_typ_2 566 589 IPR003591 -
Mtr8g2045 1010 SMART LRR_typ_2 590 615 IPR003591 -
Mtr8g2045 1010 SMART LRR_typ_2 197 221 IPR003591 -
Mtr8g2045 1010 SMART LRR_typ_2 445 469 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2045 Mtr-Chr8 30307932 30311264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2045 35 1004 Receptor kinase-like Gene Family AT3G47570 45.316 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr8g2045 Pkinase 2.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2045 - - gmx:100778093 1062.75