Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2031 ATGGAGCTATTCCCAGCACAACCAGATTTATCATTGCAAATTAGTCTTCCAAACAGCAAACAAACATCAAGTTGGAGGAGAAATACAGATGATCAAGAAGAGTTGAATGATTTAGGATTTTGGAAAAGAGCTTTGGAGTCCAAAACAGATGCAAATTACACCTTTGACCCTACCCTTTCTAATCTAAGGGCACCTTCTTCTTCTTCTTCTTCTTCAAACCTCTACAATCTCATACCTAATCCTTTTCAAAACACTAATAATTCCAACAACAACTCTTTTCAACCATTTCATCGAAAACAAAACAATTACCAAAGCCTAAGTGATGAGCTAGGGTTTCTTAAACCTATAAGAGGAATTCCAGTGTATCATCAAAACCCTAATCCTCCTATTGCTTTATTTTCTCAACCACAACCACCTTTTGATGCTTCTACTTCAAGTTCACCAGCAGCTTTTCATCCACATACTTCGATGAGATCGAAGTTGTTGCCGAGGTTTCCTTCAAAGCGTAGCGTCAGAGCTCCGAGGATGCGTTGGACTACCACTCTTCATAATCGCTTTGTTCATGCTGTTGAACTTTTAGGTGGCCATGAAAGGGCTACACCCAAATCAGTTCTTGAGCTGATGGATGTAAAGGATCTAACCTTATCACATGTTAAATCTCATTTACAGATGTACCGGACTGTGAAAATTACAGATAGACCACCAGCATCATCAGGTCAATCTGATATGTATGATAATGGTTCATCTGGAGAAACTTCTGAAGACTTGATGCTTGACATAAACTCTTCAACAAGGTCTAATGATCTGCCAGTTAAGTTGGATGCAGAAATTACTAATCAAGATAAAGAAAAACATAGTATTTGGAGCAATTCTTCAAGGGAAGCTTGGTTGCATGGTAAGCCAAAGGTCCATCCTGTTGGAAATGTGTCTTCTATTGAGGAAATGGATCCAAAGTGTGTAAGCAACGAAAGATATTCATCAGATGGAAGCTCTTCCTCAAACATTTCGGGAACAAGCTTAAAGAATCCAAATTTGGAATTCACATTAGGCAACTCAGTTTGA 1062 0.3861 MELFPAQPDLSLQISLPNSKQTSSWRRNTDDQEELNDLGFWKRALESKTDANYTFDPTLSNLRAPSSSSSSSNLYNLIPNPFQNTNNSNNNSFQPFHRKQNNYQSLSDELGFLKPIRGIPVYHQNPNPPIALFSQPQPPFDASTSSSPAAFHPHTSMRSKLLPRFPSKRSVRAPRMRWTTTLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLSHVKSHLQMYRTVKITDRPPASSGQSDMYDNGSSGETSEDLMLDINSSTRSNDLPVKLDAEITNQDKEKHSIWSNSSREAWLHGKPKVHPVGNVSSIEEMDPKCVSNERYSSDGSSSSNISGTSLKNPNLEFTLGNSV* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2031 353 MobiDBLite consensus disorder prediction 232 252 - -
Mtr8g2031 353 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 350 - -
Mtr8g2031 353 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 174 227 IPR006447 GO:0003677
Mtr8g2031 353 SUPERFAMILY Homeodomain-like 171 227 IPR009057 -
Mtr8g2031 353 Pfam Myb-like DNA-binding domain 175 226 IPR001005 -
Mtr8g2031 353 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 350 IPR044847 GO:0000976|GO:0006355|GO:0010158
Mtr8g2031 353 MobiDBLite consensus disorder prediction 11 25 - -
Mtr8g2031 353 MobiDBLite consensus disorder prediction 1 31 - -
Mtr8g2031 353 MobiDBLite consensus disorder prediction 321 353 - -
Mtr8g2031 353 MobiDBLite consensus disorder prediction 323 353 - -
Mtr8g2031 353 Gene3D - 173 230 - -
Mtr8g2031 353 MobiDBLite consensus disorder prediction 137 153 - -
Mtr8g2031 353 MobiDBLite consensus disorder prediction 233 252 - -
Mtr8g2031 353 MobiDBLite consensus disorder prediction 137 168 - -
Mtr8g2031 353 MobiDBLite consensus disorder prediction 75 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2031 Mtr-Chr8 30148794 30154287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2031 1 350 G2-like Transcription Factor Family AT4G17695 39.785 4.13e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr8g2031 Myb_DNA-binding 4.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2031 - - aprc:113868756 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1211 5 12391169 12397064 Mtr8g2031 8 30148794 30154287 PCT