LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g2017	ATGGGAATACACAACAATCCTAAAGGAACAAAAGAAATTGTTATAGATGAATGTCCATTGCTAAAAGATGAGAAAATTGAAGTTGAAATTGAACATGGTGATGATGGATCTAATAGTAACAAGAATAATGAATCAGCAGCATCATTTGCTGGTTCTGTGTTCAATCTATCAACAACTATTATTGGTGCTGGAATCATGGCTTTACCTGCAGCCATGAAAGTTTTGGGACTAACAATTGGTATTGCTTCAATCATATTCCTTGCTTTGCTTACTCATACCTCTTTGGATATTCTCATGAGGTTTAGTAGAGTTGCTAAGGCTCAATCTTATGGTGATGTCATGGGATATGCTTTTGGAAGTCTTGGTAGATTGCTTTTTCAGATTTCTGTTCTTTTTAACAACTTTGGTATTCTTGTTGTTTACATCATCATCATTGGTGATGTACTGTCTGGAACAACATCATCTGGAAGTCATCACTTCGGTGTACTTGAAGGATGGTTTGGCGAACACTGGTCGACTGGGCGTACTTTTGTTCTTCTTATTACAACCCTTGTGGTATTTGCTCCATTAGGATTCTTTAAGAGGATAGATTCATTAAAATATACTTCTGGTTTAGCAGTGGCTCTGGCAATTGTTTTTCTTGTCATAACTGCAGGAATCACATTTGTGAAATTGTTCAATGGAAGTATAGACAGTCCTAGGTTGCTTCCTAATATTACTGATATGACATCTATTTGGAATCTCTTTACAGCAGTTCCAGTTCTTGTGACAGCATTTGTTTGTCATTATAATGTGCATACAATAGACAATGAACTTGGAGACTCTTCACCAATACAACCAGTTATAAGTGCATCATTGGTTCTATGTTCTAGTATATACATTCTTACAGCTCTATTTGGGTTCCTACTATTTGGCGAGTCAACTCTTGATGATGTGCTAGCCAACTTTGATACTGATCTTGGCATCCCTTATAGCAATATTCTCAACGACGTCGTTCGTATCAGCTACGCCCTCCATCTCATGCTTGTTTTCCCGGTTATCTTCTTTTCGCTTCGCTTCAATTTGGATGATCTTGTGTTTCCCTCGGCCAGCTCTTTGGAATTAGATAATTGGAGGTTTTCCTCGATCACCACTGGACTCATATTTTTGCTCTATGTGGCTGCAAATTTTGTACCTAGCATTTGGGATGTTTTTCAATTCACTGGTGCAACTGCCACTGTTTGTCTTGGTTTTATCTTCCCTGCTGCAATTGCTCTAAGGGATCCACATAGCATTGCAACTAAGAAGGACAAGATTTTATCCATTGTCATGATTATTCTTGCTGTCTTCTCAAACATTGTGGCTATATACAGTAATGCTGATGCTTTGTTCAGAAAACACCAAAGTAAATCAAACTGA	1398	0.3777	MGIHNNPKGTKEIVIDECPLLKDEKIEVEIEHGDDGSNSNKNNESAASFAGSVFNLSTTIIGAGIMALPAAMKVLGLTIGIASIIFLALLTHTSLDILMRFSRVAKAQSYGDVMGYAFGSLGRLLFQISVLFNNFGILVVYIIIIGDVLSGTTSSGSHHFGVLEGWFGEHWSTGRTFVLLITTLVVFAPLGFFKRIDSLKYTSGLAVALAIVFLVITAGITFVKLFNGSIDSPRLLPNITDMTSIWNLFTAVPVLVTAFVCHYNVHTIDNELGDSSPIQPVISASLVLCSSIYILTALFGFLLFGESTLDDVLANFDTDLGIPYSNILNDVVRISYALHLMLVFPVIFFSLRFNLDDLVFPSASSLELDNWRFSSITTGLIFLLYVAANFVPSIWDVFQFTGATATVCLGFIFPAAIALRDPHSIATKKDKILSIVMIILAVFSNIVAIYSNADALFRKHQSKSN*	466

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g2017	465	PANTHER	TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN	9	463	-	-
	Mtr8g2017	465	PANTHER	AMINO ACID TRANSPORTER	9	463	-	-
	Mtr8g2017	465	Pfam	Transmembrane amino acid transporter protein	47	452	IPR013057	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr8g2017	Mtr-Chr8	29960657	29963557	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr8g2017	32	464	Amino Acid or Auxin Permease AAAP Family	AT3G30390	63.972	0.0	578

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g2017	K14207		-	gmx:100778699	694.501

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