Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2017 ATGGGAATACACAACAATCCTAAAGGAACAAAAGAAATTGTTATAGATGAATGTCCATTGCTAAAAGATGAGAAAATTGAAGTTGAAATTGAACATGGTGATGATGGATCTAATAGTAACAAGAATAATGAATCAGCAGCATCATTTGCTGGTTCTGTGTTCAATCTATCAACAACTATTATTGGTGCTGGAATCATGGCTTTACCTGCAGCCATGAAAGTTTTGGGACTAACAATTGGTATTGCTTCAATCATATTCCTTGCTTTGCTTACTCATACCTCTTTGGATATTCTCATGAGGTTTAGTAGAGTTGCTAAGGCTCAATCTTATGGTGATGTCATGGGATATGCTTTTGGAAGTCTTGGTAGATTGCTTTTTCAGATTTCTGTTCTTTTTAACAACTTTGGTATTCTTGTTGTTTACATCATCATCATTGGTGATGTACTGTCTGGAACAACATCATCTGGAAGTCATCACTTCGGTGTACTTGAAGGATGGTTTGGCGAACACTGGTCGACTGGGCGTACTTTTGTTCTTCTTATTACAACCCTTGTGGTATTTGCTCCATTAGGATTCTTTAAGAGGATAGATTCATTAAAATATACTTCTGGTTTAGCAGTGGCTCTGGCAATTGTTTTTCTTGTCATAACTGCAGGAATCACATTTGTGAAATTGTTCAATGGAAGTATAGACAGTCCTAGGTTGCTTCCTAATATTACTGATATGACATCTATTTGGAATCTCTTTACAGCAGTTCCAGTTCTTGTGACAGCATTTGTTTGTCATTATAATGTGCATACAATAGACAATGAACTTGGAGACTCTTCACCAATACAACCAGTTATAAGTGCATCATTGGTTCTATGTTCTAGTATATACATTCTTACAGCTCTATTTGGGTTCCTACTATTTGGCGAGTCAACTCTTGATGATGTGCTAGCCAACTTTGATACTGATCTTGGCATCCCTTATAGCAATATTCTCAACGACGTCGTTCGTATCAGCTACGCCCTCCATCTCATGCTTGTTTTCCCGGTTATCTTCTTTTCGCTTCGCTTCAATTTGGATGATCTTGTGTTTCCCTCGGCCAGCTCTTTGGAATTAGATAATTGGAGGTTTTCCTCGATCACCACTGGACTCATATTTTTGCTCTATGTGGCTGCAAATTTTGTACCTAGCATTTGGGATGTTTTTCAATTCACTGGTGCAACTGCCACTGTTTGTCTTGGTTTTATCTTCCCTGCTGCAATTGCTCTAAGGGATCCACATAGCATTGCAACTAAGAAGGACAAGATTTTATCCATTGTCATGATTATTCTTGCTGTCTTCTCAAACATTGTGGCTATATACAGTAATGCTGATGCTTTGTTCAGAAAACACCAAAGTAAATCAAACTGA 1398 0.3777 MGIHNNPKGTKEIVIDECPLLKDEKIEVEIEHGDDGSNSNKNNESAASFAGSVFNLSTTIIGAGIMALPAAMKVLGLTIGIASIIFLALLTHTSLDILMRFSRVAKAQSYGDVMGYAFGSLGRLLFQISVLFNNFGILVVYIIIIGDVLSGTTSSGSHHFGVLEGWFGEHWSTGRTFVLLITTLVVFAPLGFFKRIDSLKYTSGLAVALAIVFLVITAGITFVKLFNGSIDSPRLLPNITDMTSIWNLFTAVPVLVTAFVCHYNVHTIDNELGDSSPIQPVISASLVLCSSIYILTALFGFLLFGESTLDDVLANFDTDLGIPYSNILNDVVRISYALHLMLVFPVIFFSLRFNLDDLVFPSASSLELDNWRFSSITTGLIFLLYVAANFVPSIWDVFQFTGATATVCLGFIFPAAIALRDPHSIATKKDKILSIVMIILAVFSNIVAIYSNADALFRKHQSKSN* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2017 465 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 9 463 - -
Mtr8g2017 465 PANTHER AMINO ACID TRANSPORTER 9 463 - -
Mtr8g2017 465 Pfam Transmembrane amino acid transporter protein 47 452 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2017 Mtr-Chr8 29960657 29963557 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2017 32 464 Amino Acid or Auxin Permease AAAP Family AT3G30390 63.972 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2017 K14207 - gmx:100778699 694.501