Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2015 ATGGGAATACACAACAATCCTAAAGGAACAAAAGAAATTGTTATAGATGAATGTCCATTGCTAAAAGATGAGAAAATTGAAGTTGAAATTGAACATGGTGATGATGGATCTAATAGTAACAAGAATAATGAATCAGCAGCATCATTTGCTGGTTCTGTGTTCAATCTATCAACAACTATTATTGGTGCTGGAATCATGGCTTTACCTGCAGCCATGAAAGTTTTGGGACTAACAATTGGTATTGCTTCAATCATATTCCTTGCTTTGCTTACTCATACCTCTTTGGATATTCTCATGAGGTTTAGTAGAGTTGCTAAGGCTCAATCTTATGGTGATGTCATGGGATATGCTTTTGGAAGTCTTGGTAGATTGCTTTTTCAGATTTCTGTTCTTTTTAACAACTTTGGTATTCTTGTTGTTTACATCATCATCATTGGTGATGTACTGTCTGGAACAACTTCATCGGAAGTCATCACTTCGGTGTACTTGAAGGATGGTTTGGCGAACACTGGTCGACTGGGCGTACTTTTGTTCTTCTTATTACAACCCTTGTGGTATTTGCTCCATTAG 570 0.3702 MGIHNNPKGTKEIVIDECPLLKDEKIEVEIEHGDDGSNSNKNNESAASFAGSVFNLSTTIIGAGIMALPAAMKVLGLTIGIASIIFLALLTHTSLDILMRFSRVAKAQSYGDVMGYAFGSLGRLLFQISVLFNNFGILVVYIIIIGDVLSGTTSSEVITSVYLKDGLANTGRLGVLLFFLLQPLWYLLH* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2015 189 PANTHER AMINO ACID TRANSPORTER 9 164 - -
Mtr8g2015 189 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 9 164 - -
Mtr8g2015 189 Pfam Transmembrane amino acid transporter protein 47 154 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2015 Mtr-Chr8 29950667 29951495 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2015 32 153 Amino Acid or Auxin Permease AAAP Family AT3G30390 57.377 1.01e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2015 K14207 - mtr:MTR_8g065650 266.929