Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2013 ATGGGGATACAAAACAATCCAACAGGAACAAACGAAATTGTTGGAGAACAATATTGTCCATTGCTACAAACTAAAACAGATGAGAAAATTGAAGTTGAAATTGAACATGGTGATGATGGATCCAATAGTAACAAGAATAATGAATCAGCAGCATCATTTTCTGGTTCTGTGTTCAATCTATCAACAACTATTATTGGTGCTGGAATCATGGCTTTACCTGCAGCCATGAAAGTTTTGGGACTAACCATTGGTATTGCTTCAATCATATTCCTTGCTTTGCTTAGTCATACCTCTTTGGATATTCTCATGAGGTTTAGTAGAGTTGCTAAGGCTCAATCTTATGGTGATGTCATGGGATATGCTTTTGGAAGTCTTGGTAGATTGCTTTTTCAGATTTCTGTTCTTTTTAACAACTTTGGTATTCTTGTTGTTTACATCATCATCATTGGTGATGTACTGTCTGGAACAACTTCATCTGGAAGTCATCACTTCGGTGTACTTAAAGGATGGTTTGGCGAACACTGGTCGACTGGGCGTACTTTTGTTCTTCTTATTACAACCCTTGTGGTATTTGCTCCATTAGGATTCTTTAAGAGGATAGATTCATTAAAATATACTTCTGGTTTAGCAGTGGCTCTGGCAATTGTTTTTCTTGTCATAACTGCAGGAATCACATTTGTGAAATTGTTTAATGGAAGTATAGACAGTCCTAGGTTGCTTCCTAATATTACTGATATGACATCTATTTGGAATCTCTTTACAGCAGTTCCAGTTCTTGTGACAGCATTTGTTTGTCATTATAATGTGCATACAATAGACAATGAACTTGGAGACTCTTCACCAATGCAACCAGTTATAAGTGCATCACTGGTTCTATGTTCTAGTATATACATTCTTACAGCTCTATTTGGGTTCCTACTATTTGGCGAGTCAACTCTTGATGATGTGCTAGCCAACTTTGATACTGATCTTGGCATCCCTTATAGCAATATTCTCAATGACGTCGTTCGTATCAGCTACGCCCTCCATCTCATGCTTGTTTTCCCGGTTATCTTCTTTTCGCTTCGCTTCAATTTGGATGATCTTGTGTTTCCCTCGGCCAGCTCTTTGGAATTAGATAATTGGAGGTTTTCCTCGATCACCACTAGACTCATATTTTTGCTCTATGTGGCTGCAAATTTTGTACCTAGCATTTGGGATGTTTTTCAATTCACTGGTGCAACTGCCACTGTTTGTCTTGGTTTTATCTTCCCTGCTGCAATTGCTCTAAGGGATCCACAAAGCATTGCAACTAAGAAGGACAAGATTTTATCCATTGTCATGATTATTCTTGCTGTCTTCTCAAACATTGTGGCTATATACAGTGATGCTGATGCTTTGTTCAGAAAACACCAAAGTAAATCAAACTGA 1410 0.3794 MGIQNNPTGTNEIVGEQYCPLLQTKTDEKIEVEIEHGDDGSNSNKNNESAASFSGSVFNLSTTIIGAGIMALPAAMKVLGLTIGIASIIFLALLSHTSLDILMRFSRVAKAQSYGDVMGYAFGSLGRLLFQISVLFNNFGILVVYIIIIGDVLSGTTSSGSHHFGVLKGWFGEHWSTGRTFVLLITTLVVFAPLGFFKRIDSLKYTSGLAVALAIVFLVITAGITFVKLFNGSIDSPRLLPNITDMTSIWNLFTAVPVLVTAFVCHYNVHTIDNELGDSSPMQPVISASLVLCSSIYILTALFGFLLFGESTLDDVLANFDTDLGIPYSNILNDVVRISYALHLMLVFPVIFFSLRFNLDDLVFPSASSLELDNWRFSSITTRLIFLLYVAANFVPSIWDVFQFTGATATVCLGFIFPAAIALRDPQSIATKKDKILSIVMIILAVFSNIVAIYSDADALFRKHQSKSN* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2013 469 Pfam Transmembrane amino acid transporter protein 51 455 IPR013057 -
Mtr8g2013 469 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 9 467 - -
Mtr8g2013 469 PANTHER AMINO ACID TRANSPORTER 9 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2013 Mtr-Chr8 29944153 29953588 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2013 4 468 Amino Acid or Auxin Permease AAAP Family AT3G30390 60.430 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2013 K14207 - gmx:100778699 679.863