Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1991 ATGGCTCCAAATCTCAATAGTAATAGCAAGGTTTCTGCTTCTTCTTCTTCTGCATCTTCTATTTTATCTTTTTCTTCTCCATTTTTACCTTTATTTGAAAATAAGAAAGATCCTGGCAAAAAAAAGGATGACAAGGATAAAGACAAGGACAAAGCGCAATCACCATCTAAGTCCGATCCTCCGGAAAGTTCTCCGTCACACTCGCCACCACCACCAAAGCCTCATTCACCGCCTAAAGTTTTACCTCCACCACCGTCACCACCACTACCGTCACCACCACCACCCTCTCCACCACCAAACTCACCTCCACCACCATCACCGCCACCTCCGTCGTTATCTCCATCTCCAGCTTTACCTCCTCCACCACCATTGCCCAATGTGCAATATTCTGCTTCTGCTTTATCATCTCCTCCTAATTCTCTCCGTAAACAACCACCTCCGTCACTGCCTCCCCCGGAGAAATCTCCTACATCTTCATCATCATCATCATCATCATCATCATCGTCCTCTTCTTCTTCTTCTTCTACATCCTCGAAGGATTCGCCACATAAAGCAATGCATGCAAAATCAGGGAGTTCTCATTCCTCTGGCCACACGCCCGGTGAAATAGCTGCTTATGCCATTGCCGCAGTTTTGGTTGTCGCCATAGTTGTGGCAGCTGTTTTTTTTGCGTTTAGGAAGAAGAAAACGAAAGGGGATGCATATGTTGGACCCTATATACCACCCCCTGGTAGCTTCCACATTAAATCAAGTGCTAATGGACATTACTATGTACAGCAACCTTCCCCTGGAAACATCTATGGCAATGTGAACGTTGAAGGACGCAACACGAAGCACTTGGGAGGAGGAGGAGGTCCTTTAGATCCGGCGCAGCCAATAAGTGCTCAGATAGCTTTTACTTATGACATGGTAATGGAAATAACAAATGCATTTTCTAGTCAAAATGTGATAGGGCAAGGAGGATTTGGGTGTGTTTACAAGGGTTGGTTGCCGGACGGAAAAGAAGTGGCAGTCAAGACTCTTAAGGCTGGTAGCGGGCAGGGAGATAGGGAGTTCAGGGCCGAAGTGGAGATCATTAGCCGTGTTCATCATCGGCATTTGGTATCGTTGGCTGGTTATTGTATATCTGAGGAGCAAAGAGTGCTTATCTACGAGTTTGTTCCTAATGGAAATCTTCATCATCACTTGCATGGAAGTGGAATGCCAGTGTTGGCTTGGGACAAGAGGCTAAAGATAGCTATTGGTGCTGCAAAAGGCCTGGCATATCTGCATGAGGACTGCAGCCAAAAGATTATTCACAGAGATATTAAATCCGCCAACATACTATTGGATGATGCTTTTGAAGCACAGGTTGCAGATTTTGGACTTGCAAAGCTAGCTGATGCTGCCCATACGCATGTATCAACCAGGGTTATGGGTACCTTTGGGTACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTTTTCTCATTTGGGGTTGTCCTCCTTGAGCTTGTAACTGGAAGAAAACCAGTTGATGAAAGTAGGCCTTTGGGAGATGAGAGTTTGGTTGAGTGGGCTCGACCACAACTTATCCATGCTTTTGAGACACGCGAGTTTGGTGAACTAGTAGACCCGAGACTAGAAAAACACTACGTGGAGAGTGAAATGTTCAGAATGGTAGAGGCAGCTGCAGCTTGTGTTCGCCACTCAGCTCCTAAACGACCTCGTATGTCTCAGGTGGTAAGAGCATTAGACACTGGAGATGAAGTATTCGATTTATCAAACGGAGTGAAATATGGTCAGAGCACTGTTTATGATTCTCGACAGTATGACAAAGACATCATGCTATTCAGGAGGATGGGCAATGGCAGCTATGTTGATTCTGAATTATCAATATACAGTGGAGAATCCAGTGTTTCAAGAGAACATTCGAGATCCCATCATGCATGGATGCACAGCGGTTCGAGTACCGAGTCAGAATCAAGAGCATTCAATAGGAATAGAAACAGTACTGAATAA 2019 0.4517 MAPNLNSNSKVSASSSSASSILSFSSPFLPLFENKKDPGKKKDDKDKDKDKAQSPSKSDPPESSPSHSPPPPKPHSPPKVLPPPPSPPLPSPPPPSPPPNSPPPPSPPPPSLSPSPALPPPPPLPNVQYSASALSSPPNSLRKQPPPSLPPPEKSPTSSSSSSSSSSSSSSSSSSTSSKDSPHKAMHAKSGSSHSSGHTPGEIAAYAIAAVLVVAIVVAAVFFAFRKKKTKGDAYVGPYIPPPGSFHIKSSANGHYYVQQPSPGNIYGNVNVEGRNTKHLGGGGGPLDPAQPISAQIAFTYDMVMEITNAFSSQNVIGQGGFGCVYKGWLPDGKEVAVKTLKAGSGQGDREFRAEVEIISRVHHRHLVSLAGYCISEEQRVLIYEFVPNGNLHHHLHGSGMPVLAWDKRLKIAIGAAKGLAYLHEDCSQKIIHRDIKSANILLDDAFEAQVADFGLAKLADAAHTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDESRPLGDESLVEWARPQLIHAFETREFGELVDPRLEKHYVESEMFRMVEAAAACVRHSAPKRPRMSQVVRALDTGDEVFDLSNGVKYGQSTVYDSRQYDKDIMLFRRMGNGSYVDSELSIYSGESSVSREHSRSHHAWMHSGSSTESESRAFNRNRNSTE* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1991 672 SUPERFAMILY Protein kinase-like (PK-like) 291 584 IPR011009 -
Mtr8g1991 672 Gene3D Phosphorylase Kinase; domain 1 290 386 - -
Mtr8g1991 672 PRINTS Proline rich extensin signature 54 70 - -
Mtr8g1991 672 PRINTS Proline rich extensin signature 80 97 - -
Mtr8g1991 672 PRINTS Proline rich extensin signature 98 123 - -
Mtr8g1991 672 MobiDBLite consensus disorder prediction 650 672 - -
Mtr8g1991 672 Gene3D Transferase(Phosphotransferase) domain 1 387 596 - -
Mtr8g1991 672 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 50 654 - -
Mtr8g1991 672 MobiDBLite consensus disorder prediction 1 27 - -
Mtr8g1991 672 Pfam Protein tyrosine and serine/threonine kinase 314 584 IPR001245 GO:0004672|GO:0006468
Mtr8g1991 672 MobiDBLite consensus disorder prediction 1 198 - -
Mtr8g1991 672 MobiDBLite consensus disorder prediction 155 181 - -
Mtr8g1991 672 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Mtr8g1991 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Mtr8g1991 672 MobiDBLite consensus disorder prediction 644 672 - -
Mtr8g1991 672 MobiDBLite consensus disorder prediction 62 127 - -
Mtr8g1991 672 ProSiteProfiles Protein kinase domain profile. 311 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1991 672 MobiDBLite consensus disorder prediction 34 56 - -
Mtr8g1991 672 CDD STKc_IRAK 317 585 - -
Mtr8g1991 672 MobiDBLite consensus disorder prediction 140 154 - -
Mtr8g1991 672 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 50 654 - -
Mtr8g1991 672 SMART serkin_6 311 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1991 Mtr-Chr8 29720755 29725841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1991 199 650 Trihelix Transcription Factor Family AT5G38560 53.965 1.86e-168 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mtr8g1991 PK_Tyr_Ser-Thr 7.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1991 - - lang:109330554 659.833