Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1966 ATGAATAACCAGCTTAATCACATAATTCACACCCTCTTTATCTTCACTATCATCATTCTTTCCACACTCACTGAAGGTTTTGCAGTAAATCATGCAGAAGAGAAAAGGAAAAACTCATTCACTCCAAAGGCGTATGCAATTCGGTATTGGGACAGAGTGATCAAAAACAACTTGCCAAAACCATCCTTCATCCTCTCCAAGGCGTCACCACTTAGCGCCACCGATGCTGCAGCTTTTGAAAAGCACGCTGCCGCCAACACATTATCCACAAAGTTGCCGGAATTCTGCTCTGCCGCACATCTCTTCTGCTTCCCGAACATAAATCCACAACTTTGTCGTAAACCCGTTCTCAGAGGATTAGGAACCAACATTTTCAAAGGATATGGTAAAGGAGTTGATTTAGATAACAAGTTTAGCTTCGACAATTACGGTTTTACTAACCCTTTCAAAGATTACGCCAAAAGAGGTATTTCATTCGGCATCTACACTAAATCTTCTTCAACTAACTCCGTTACCAGTTTGGTGGTTGAACCAGGTAAGTTTTTCCGCGAAAGGATGTTGAAGGAAGGGACTGTTATGCCTATGCCAGATACAAGGGATAAGTTACCACCTAGGTCGTTTTTGCCACGTTCCATTTTGATCAAATTGCCCTTTGCATCTTCTAAGTTGAACAATATGAAGCAAGTTTTCAAGGTGTCTGAAAATTCCTTTATGGAAAAGATGATAGTGGACTCATTGAGTGAGTGTGAAAGAGCGCCAAGTAAAGGTGAGATCAAGCGTTGTGTAGGTTCGCTTGAGGACATGATTGACTTTGCAACTTCTATTTTGGGTAGCAATGTGACGGTTCGGTCCACTGAGAATGTAAATGGGTCGAACAACAATGTTATGGTAGGTCAAGTAAAGGAGATAAATGGTGGGAACGTTATGGAGTCAGTGTCTTGTCATCAAAGTTTGTTTCCTTACTTGCTATATTACTGTCATTCGGTGCCAAATATTCGAATTTATGAAGCGAATCTTTTGGACCCTAAGTCTAAGGTGAAGATAAATCATGGTGTTGCGATCTGTCACTTGGATACAACTGCTTGGAGTCCCACTCATGGTGCATTCATGACTCTTGGGTTCGGTCCTGGTCAGATTGAAGTGTGTCATTGGATATTTGAGAATGATATGACATGGACTACCGCAAATTGA 1191 0.4139 MNNQLNHIIHTLFIFTIIILSTLTEGFAVNHAEEKRKNSFTPKAYAIRYWDRVIKNNLPKPSFILSKASPLSATDAAAFEKHAAANTLSTKLPEFCSAAHLFCFPNINPQLCRKPVLRGLGTNIFKGYGKGVDLDNKFSFDNYGFTNPFKDYAKRGISFGIYTKSSSTNSVTSLVVEPGKFFRERMLKEGTVMPMPDTRDKLPPRSFLPRSILIKLPFASSKLNNMKQVFKVSENSFMEKMIVDSLSECERAPSKGEIKRCVGSLEDMIDFATSILGSNVTVRSTENVNGSNNNVMVGQVKEINGGNVMESVSCHQSLFPYLLYYCHSVPNIRIYEANLLDPKSKVKINHGVAICHLDTTAWSPTHGAFMTLGFGPGQIEVCHWIFENDMTWTTAN* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1966 396 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 121 396 - -
Mtr8g1966 396 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 11 106 - -
Mtr8g1966 396 SMART BURP_2 179 395 IPR004873 -
Mtr8g1966 396 Pfam BURP domain 181 393 IPR004873 -
Mtr8g1966 396 PANTHER POLYGALACTURONASE-1 NON-CATALYTIC SUBUNIT BETA 121 396 - -
Mtr8g1966 396 PANTHER POLYGALACTURONASE-1 NON-CATALYTIC SUBUNIT BETA 11 106 - -
Mtr8g1966 396 ProSiteProfiles BURP domain profile. 181 395 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1966 Mtr-Chr8 29549409 29550944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1966 - - mtr:MTR_8g064500 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1966 8 29549409 29550944 Mtr8g1966 8 29549409 29550944 ECH
Mtr5g1410 5 14775448 14778389 Mtr8g1966 8 29549409 29550944 PCT