Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1957 ATGGCTTCTTCAACCAAAATCTCAAGACTTATCTCTCGATCATTTTCTTCTGCTTCTTCATCTTCTACCTCTTTGTTTTCTCGAGGTGGAAATGGTTATCTGGGTGGATTACTCTCTAAATACAGCACTGCTGCTGCCATCGATGAACAACCGATTAAACCATCGGTGCAAGTAGATCACACTCAGCTCTTAATTGATGGCAAATTTGTAGATGCTGCTTCTGGTAAAACATTTCCAACATTGGATCCAAGGACAGGGGAAGTGATTGCTCATGTTGCTGAGGGTCACTCTGAAGATGTTGATAGAGCCGTTGCAGCTGCACGCAAAGCATTCGATCAAGGGCCGTGGCCTAAGTTTCCTGCCTATGAAAGGCAAAAGATAATGTTGCGTGCTGCTGATTTGATTGAAAAGCATAACGATCAAATTGCAGCACTTGAGACTTGGGATAATGGGAAACCATATGAACAATCTGCTCAGATTGAAATTCCAATGCTGGTTCGCCTATTTCGTTACTATGCTGGTTGGGCAGATAAGATTCATGGGCTCACAGTTCCAGCTGATGGACCATATCATGTGCAGACATTGCACGAACCGATTGGCGTTGCTGGTCAAATCATTCCATGGAACTTCCCTCTTCTCATGTTTGCTTGGAAGGTTGGACCCGCATTGGCGTGTGGCAACACCGTTGTTCTAAAAACAGCTGAACAGACACCATTGTCTGCTTTGTATGTAGCAAAACTATTTCACGAGGCCGGACTTCCTGCTGGTGTGTTGAATATAATATCTGGCTTTGGTCCAACTGCAGGTGCTGCTCTTGCTAGTCACATGGATGTTGATAAGCTTGCATTTACTGGTTCAACCGATACCGGAAAAGTTGTCCTTCAACTGGCAGCTAAAAGCAATCTTAAGCCGGTAACTTTGGAGCTTGGAGGGAAATCTCCGTTTATTGTCTGCGAAGATGCTGATATAGATGAAGCTGTTGAGCTAGCACACTTTGCCTTATTCTTCAACCAGGGACAATGTTGCTGTGCCGGGTCTCGAACATTTGTACATGAACGTGTCCATGAGGAGTTTGTTGAGAAAGCAAAGGCCCGTGCTTTGAAACGTGCTGTAGGAGATCCATTTAAGTCAGGAACAGAACAAGGTCCTCAGATTGATTCAAAGCAATTTGAGAAAATATTGAAGTATATTAGATCTGGCGTTGAAAATGGCGCTACACTTGAAACTGGAGGAGAAAGACTTGGTAGCAAGGGCTACTATATTCAGCCTACTGTCTTCTCAAATGTTCAGGATGGCATGCAGATTGCAAAGGAAGAGATATTTGGTCCAGTACAAACCATATTGAAATTCAAGGATCTTGGTGAGGTAATTCAAAGAGCAAACAATTCAAAGTATGGTCTTGCAGCAGGGGTTTTCACAAAGAACATAGACACTGCAAATACTTTGACTAGAGCATTGAAAGTTGGAACAGTTTGGGTAAATTGCTTTGATACATTTGATGCTGCAATTCCTTTTGGTGGATATAAGATGAGTGGACAAGGCAGAGAAAAAGGAGAATATAGTCTTAAAAACTACTTGCAAGTGAAGGCTGTTGTTACACCTTTGAAGAATCCAGCATGGCTTTGA 1626 0.428 MASSTKISRLISRSFSSASSSSTSLFSRGGNGYLGGLLSKYSTAAAIDEQPIKPSVQVDHTQLLIDGKFVDAASGKTFPTLDPRTGEVIAHVAEGHSEDVDRAVAAARKAFDQGPWPKFPAYERQKIMLRAADLIEKHNDQIAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTPLSALYVAKLFHEAGLPAGVLNIISGFGPTAGAALASHMDVDKLAFTGSTDTGKVVLQLAAKSNLKPVTLELGGKSPFIVCEDADIDEAVELAHFALFFNQGQCCCAGSRTFVHERVHEEFVEKAKARALKRAVGDPFKSGTEQGPQIDSKQFEKILKYIRSGVENGATLETGGERLGSKGYYIQPTVFSNVQDGMQIAKEEIFGPVQTILKFKDLGEVIQRANNSKYGLAAGVFTKNIDTANTLTRALKVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1957 541 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 35 541 - -
Mtr8g1957 541 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 335 346 IPR016160 GO:0016491
Mtr8g1957 541 SUPERFAMILY ALDH-like 57 535 IPR016161 GO:0016491
Mtr8g1957 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 313 502 IPR016163 GO:0016620
Mtr8g1957 541 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 35 541 - -
Mtr8g1957 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 75 531 IPR016162 GO:0016491
Mtr8g1957 541 CDD ALDH_F2BC 58 533 - -
Mtr8g1957 541 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 307 314 IPR029510 GO:0016491
Mtr8g1957 541 Pfam Aldehyde dehydrogenase family 69 531 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1957 Mtr-Chr8 29398619 29402833 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1957 3 541 Aldehyde Dehydrogenase Gene Family AT3G48000 76.852 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1957 K00128 - gmx:100811891 953.74